Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TPRX1P1-201ENST00000557620 319 ntBASIC5.4□□□□□ -1.54
LRRC28Q86X40 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.4□□□□□ -1.54
LRRC28Q86X40 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
LRRC28Q86X40 AC060780.2-201ENST00000589047 198 ntBASIC5.4□□□□□ -1.54
LRRC28Q86X40 AC020916.2-201ENST00000591242 360 ntBASIC5.4□□□□□ -1.54
LRRC28Q86X40 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LRRC28Q86X40 RPL12P48-201ENST00000605620 304 ntBASIC5.4□□□□□ -1.54
LRRC28Q86X40 uc_338.29-201ENST00000615099 168 ntBASIC5.4□□□□□ -1.54
LRRC28Q86X40 AC079776.5-201ENST00000641920 211 ntBASIC5.4□□□□□ -1.54
LRRC28Q86X40 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.4□□□□□ -1.55
LRRC28Q86X40 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.4□□□□□ -1.55
LRRC28Q86X40 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
LRRC28Q86X40 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
LRRC28Q86X40 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.55
LRRC28Q86X40 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.4□□□□□ -1.55
LRRC28Q86X40 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
LRRC28Q86X40 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
LRRC28Q86X40 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
LRRC28Q86X40 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 AC027279.4-201ENST00000624371 2072 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 AL353743.3-201ENST00000442109 1468 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRRC28Q86X40 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LRRC28Q86X40 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRRC28Q86X40 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LRRC28Q86X40 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRRC28Q86X40 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRRC28Q86X40 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRRC28Q86X40 SNORD16-201ENST00000362803 99 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 RN7SKP128-201ENST00000364270 303 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 RN7SKP171-201ENST00000364417 303 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 AC003045.1-201ENST00000398779 713 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 RN7SKP281-201ENST00000410472 352 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 RPL24P2-201ENST00000421023 475 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 REREP1Y-201ENST00000422655 198 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 VN1R20P-201ENST00000425215 966 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 AC099782.1-201ENST00000425889 474 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 VTI1BP4-201ENST00000427516 527 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 REREP2Y-201ENST00000439103 200 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 COX4I1P2-201ENST00000447446 547 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 AL162739.1-201ENST00000450606 307 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 AC019084.1-201ENST00000457337 432 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 RN7SL168P-201ENST00000463821 279 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 AC090602.1-201ENST00000469695 252 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 H3F3AP5-201ENST00000475267 429 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 AC005017.1-201ENST00000482002 490 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 TOMM22P4-201ENST00000511318 336 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 AC016839.1-201ENST00000578162 867 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 AL136097.3-201ENST00000611097 505 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 MIR6811-201ENST00000620409 58 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 MIR7159-201ENST00000620587 66 ntBASIC5.39□□□□□ -1.55
LRRC28Q86X40 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRRC28Q86X40 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRRC28Q86X40 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRRC28Q86X40 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LRRC28Q86X40 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LRRC28Q86X40 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.39□□□□□ -1.55
LRRC28Q86X40 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
LRRC28Q86X40 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRRC28Q86X40 UGT2B24P-201ENST00000514441 1597 ntBASIC5.38□□□□□ -1.55
LRRC28Q86X40 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRRC28Q86X40 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LRRC28Q86X40 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
LRRC28Q86X40 AC114774.1-201ENST00000507410 1770 ntBASIC5.38□□□□□ -1.55
LRRC28Q86X40 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRRC28Q86X40 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRRC28Q86X40 RNA5SP198-201ENST00000410376 127 ntBASIC5.38□□□□□ -1.55
LRRC28Q86X40 AL157884.1-201ENST00000424561 454 ntBASIC5.38□□□□□ -1.55
LRRC28Q86X40 AL139158.1-201ENST00000424719 340 ntBASIC5.38□□□□□ -1.55
LRRC28Q86X40 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.38□□□□□ -1.55
LRRC28Q86X40 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
LRRC28Q86X40 RN7SL552P-201ENST00000462094 276 ntBASIC5.38□□□□□ -1.55
LRRC28Q86X40 GM2AP2-201ENST00000491764 562 ntBASIC5.38□□□□□ -1.55
LRRC28Q86X40 AC106822.1-201ENST00000502647 526 ntBASIC5.38□□□□□ -1.55
LRRC28Q86X40 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.38□□□□□ -1.55
LRRC28Q86X40 AC090958.1-201ENST00000511122 351 ntBASIC5.38□□□□□ -1.55
LRRC28Q86X40 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.38□□□□□ -1.55
LRRC28Q86X40 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.38□□□□□ -1.55
LRRC28Q86X40 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.38□□□□□ -1.55
LRRC28Q86X40 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.38□□□□□ -1.55
LRRC28Q86X40 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms