Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MTND2P25-201ENST00000449028 610 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 HSFY5P-201ENST00000453726 309 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 snoU13.29-201ENST00000459370 104 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 RN7SL70P-201ENST00000478322 302 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 NPM1P28-201ENST00000492269 840 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 RNA5SP75-201ENST00000516841 111 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 RPL3P13-201ENST00000550415 216 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 AC089984.3-201ENST00000552838 363 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 AC125494.2-201ENST00000602431 657 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 AC004805.3-201ENST00000603178 310 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 AC073046.2-201ENST00000604756 527 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 AC069234.4-201ENST00000621276 412 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHFQ7M4L6 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHFQ7M4L6 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHFQ7M4L6 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHFQ7M4L6 AL353743.3-201ENST00000442109 1468 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHFQ7M4L6 RPL31P11-201ENST00000426558 1558 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHFQ7M4L6 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 AC139426.3-201ENST00000605648 2059 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHFQ7M4L6 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHFQ7M4L6 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHFQ7M4L6 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHFQ7M4L6 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHFQ7M4L6 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHFQ7M4L6 AL355834.1-201ENST00000556602 3965 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 AC020656.2-201ENST00000613291 5309 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHFQ7M4L6 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHFQ7M4L6 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 RNU4-39P-201ENST00000362455 127 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 SNORA27.3-201ENST00000364937 134 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHFQ7M4L6 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHFQ7M4L6 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 CDC42P6-201ENST00000421246 576 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 CCNT2P1-201ENST00000423082 1315 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 AL020997.1-201ENST00000446554 349 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 AC009244.1-201ENST00000450566 258 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 AL133480.2-201ENST00000456723 487 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 AC015908.1-201ENST00000478739 476 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 AL035690.1-201ENST00000490892 383 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 MINOS1P4-201ENST00000515470 318 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 NPM1P52-201ENST00000518264 846 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 AC009879.1-201ENST00000520029 839 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHFQ7M4L6 NPM1P5-201ENST00000557228 838 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 TPRX1P1-201ENST00000557620 319 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 AC027281.1-201ENST00000574178 758 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 RN7SL475P-201ENST00000583379 298 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 AC005702.3-201ENST00000585345 1447 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 MIR132-201ENST00000591554 101 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 AC006924.1-201ENST00000610750 559 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 AL359742.1-201ENST00000622497 540 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 LINC00216-201ENST00000623548 1126 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 LINC02495-203ENST00000636704 242 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 OR7E91P-202ENST00000642062 1198 ntBASIC5.61□□□□□ -1.51
SHFQ7M4L6 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHFQ7M4L6 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHFQ7M4L6 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SHFQ7M4L6 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms