Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ARL5AP3-201ENST00000439327 386 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 RN7SL393P-201ENST00000463588 296 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 RN7SL187P-201ENST00000495587 303 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 SNORA70.11-201ENST00000515987 138 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 SNORA70.13-201ENST00000516116 138 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 EIF4A3P1-201ENST00000578499 647 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 RPL7AP69-201ENST00000595306 806 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 DIMT1P1-201ENST00000603970 763 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 GAPDHP41-201ENST00000613707 975 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 HTR1DP1-201ENST00000616500 888 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AC008626.2-201ENST00000624425 248 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AC027279.1-201ENST00000568885 4284 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AC239868.2-201ENST00000564237 4527 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.59□□□□□ -1.52
C11orf88Q6PI97 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.59□□□□□ -1.52
C11orf88Q6PI97 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 SNORD94-201ENST00000386037 137 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AL033519.1-201ENST00000407266 307 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AC244453.4-201ENST00000419150 388 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AC006065.1-201ENST00000422539 802 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AP003385.1-201ENST00000426387 893 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AC007365.2-201ENST00000428806 458 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AC093716.1-201ENST00000435923 377 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AL591363.1-201ENST00000450091 483 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 CFL1P4-201ENST00000451536 498 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AP003385.3-201ENST00000472498 287 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 RN7SL790P-201ENST00000474043 298 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AC114728.1-201ENST00000488289 483 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 NPM1P27-201ENST00000502784 830 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 RN7SKP11-201ENST00000517018 287 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AP002004.1-206ENST00000532441 876 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AC078878.1-201ENST00000539832 958 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AL132640.1-201ENST00000559594 619 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AC106785.4-201ENST00000569492 412 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AC012254.3-201ENST00000591183 2117 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AL121890.2-201ENST00000617644 465 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AP000577.1-201ENST00000624366 878 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AC096992.2-201ENST00000609553 1684 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AC093671.1-201ENST00000624981 2929 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 AL161756.3-201ENST00000641216 2071 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 CASC19-281ENST00000642118 1554 ntBASIC5.58□□□□□ -1.52
C11orf88Q6PI97 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
C11orf88Q6PI97 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms