Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC110792.4-201ENST00000609843 298 ntBASIC5.77□□□□□ -1.49
LTBQ06643 AL137246.2-201ENST00000613439 662 ntBASIC5.77□□□□□ -1.49
LTBQ06643 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
LTBQ06643 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.77□□□□□ -1.49
LTBQ06643 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.77□□□□□ -1.49
LTBQ06643 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LTBQ06643 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LTBQ06643 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.77□□□□□ -1.49
LTBQ06643 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
LTBQ06643 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
LTBQ06643 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.77□□□□□ -1.49
LTBQ06643 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LTBQ06643 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LTBQ06643 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
LTBQ06643 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
LTBQ06643 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.77□□□□□ -1.49
LTBQ06643 AC233968.1-201ENST00000611212 1300 ntBASIC5.76□□□□□ -1.49
LTBQ06643 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LTBQ06643 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LTBQ06643 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
LTBQ06643 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LTBQ06643 HSPD1P8-201ENST00000400121 1658 ntBASIC5.76□□□□□ -1.49
LTBQ06643 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
LTBQ06643 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
LTBQ06643 SNORD8-201ENST00000363915 110 ntBASIC5.76□□□□□ -1.49
LTBQ06643 RN7SKP275-201ENST00000364626 301 ntBASIC5.76□□□□□ -1.49
LTBQ06643 RPL23AP18-201ENST00000416139 468 ntBASIC5.76□□□□□ -1.49
LTBQ06643 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.76□□□□□ -1.49
LTBQ06643 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.76□□□□□ -1.49
LTBQ06643 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
LTBQ06643 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.76□□□□□ -1.49
LTBQ06643 ARMC4P1-201ENST00000438905 707 ntBASIC5.76□□□□□ -1.49
LTBQ06643 SUMO2P1-206ENST00000445436 284 ntBASIC5.76□□□□□ -1.49
LTBQ06643 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.76□□□□□ -1.49
LTBQ06643 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.76□□□□□ -1.49
LTBQ06643 RN7SL165P-201ENST00000477476 291 ntBASIC5.76□□□□□ -1.49
LTBQ06643 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
LTBQ06643 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.76□□□□□ -1.49
LTBQ06643 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LTBQ06643 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.76□□□□□ -1.49
LTBQ06643 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.76□□□□□ -1.49
LTBQ06643 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.76□□□□□ -1.49
LTBQ06643 AC110056.1-201ENST00000525759 911 ntBASIC5.76□□□□□ -1.49
LTBQ06643 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.76□□□□□ -1.49
LTBQ06643 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.76□□□□□ -1.49
LTBQ06643 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.76□□□□□ -1.49
LTBQ06643 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.76□□□□□ -1.49
LTBQ06643 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.76□□□□□ -1.49
LTBQ06643 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.76□□□□□ -1.49
LTBQ06643 AL136520.1-202ENST00000555494 763 ntBASIC5.76□□□□□ -1.49
LTBQ06643 MTND1P8-201ENST00000571424 950 ntBASIC5.76□□□□□ -1.49
LTBQ06643 AL078601.3-201ENST00000573303 535 ntBASIC5.76□□□□□ -1.49
LTBQ06643 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
LTBQ06643 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.76□□□□□ -1.49
LTBQ06643 AP000919.1-201ENST00000582850 985 ntBASIC5.76□□□□□ -1.49
LTBQ06643 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.76□□□□□ -1.49
LTBQ06643 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.76□□□□□ -1.49
LTBQ06643 AC008521.2-201ENST00000591021 259 ntBASIC5.76□□□□□ -1.49
LTBQ06643 PCA3_2.1-201ENST00000612507 409 ntBASIC5.76□□□□□ -1.49
LTBQ06643 AC104307.1-201ENST00000616142 196 ntBASIC5.76□□□□□ -1.49
LTBQ06643 AC004808.2-201ENST00000627965 773 ntBASIC5.76□□□□□ -1.49
LTBQ06643 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LTBQ06643 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.76□□□□□ -1.49
LTBQ06643 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.76□□□□□ -1.49
LTBQ06643 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.76□□□□□ -1.49
LTBQ06643 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LTBQ06643 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LTBQ06643 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LTBQ06643 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LTBQ06643 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LTBQ06643 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
LTBQ06643 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LTBQ06643 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
LTBQ06643 AC011369.2-201ENST00000624423 1567 ntBASIC5.76□□□□□ -1.49
LTBQ06643 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
LTBQ06643 CIR1P2-201ENST00000514821 1342 ntBASIC5.75□□□□□ -1.49
LTBQ06643 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
LTBQ06643 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LTBQ06643 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LTBQ06643 GUCY1B2-204ENST00000531898 1979 ntBASIC5.75□□□□□ -1.49
LTBQ06643 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
LTBQ06643 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LTBQ06643 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LTBQ06643 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LTBQ06643 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LTBQ06643 RNA5SP478-201ENST00000364657 115 ntBASIC5.75□□□□□ -1.49
LTBQ06643 RN7SKP81-201ENST00000365603 331 ntBASIC5.75□□□□□ -1.49
LTBQ06643 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.75□□□□□ -1.49
LTBQ06643 GCNT1P4-201ENST00000404096 329 ntBASIC5.75□□□□□ -1.49
LTBQ06643 AC116036.1-201ENST00000412199 367 ntBASIC5.75□□□□□ -1.49
LTBQ06643 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.75□□□□□ -1.49
LTBQ06643 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LTBQ06643 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.75□□□□□ -1.49
LTBQ06643 AL157884.1-201ENST00000424561 454 ntBASIC5.75□□□□□ -1.49
LTBQ06643 BX119904.3-201ENST00000428194 957 ntBASIC5.75□□□□□ -1.49
LTBQ06643 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.75□□□□□ -1.49
LTBQ06643 AMYP1-201ENST00000440059 1023 ntBASIC5.75□□□□□ -1.49
LTBQ06643 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LTBQ06643 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.75□□□□□ -1.49
LTBQ06643 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms