Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC7.26□□□□□ -1.25
NUP98P52948 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NUP98P52948 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
NUP98P52948 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
NUP98P52948 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC7.26□□□□□ -1.25
NUP98P52948 AC235565.1-201ENST00000456962 1325 ntBASIC7.26□□□□□ -1.25
NUP98P52948 AC078880.4-201ENST00000617627 1749 ntBASIC7.26□□□□□ -1.25
NUP98P52948 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
NUP98P52948 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NUP98P52948 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
NUP98P52948 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.26□□□□□ -1.25
NUP98P52948 AL357752.1-201ENST00000412817 349 ntBASIC7.26□□□□□ -1.25
NUP98P52948 HMGA1P8-201ENST00000414130 321 ntBASIC7.26□□□□□ -1.25
NUP98P52948 PRUNEP1-201ENST00000425846 705 ntBASIC7.26□□□□□ -1.25
NUP98P52948 CFL1P1-202ENST00000432948 411 ntBASIC7.26□□□□□ -1.25
NUP98P52948 VDAC2P4-201ENST00000452925 711 ntBASIC7.26□□□□□ -1.25
NUP98P52948 AP000547.1-201ENST00000454360 617 ntBASIC7.26□□□□□ -1.25
NUP98P52948 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.26□□□□□ -1.25
NUP98P52948 NRBF2P4-201ENST00000520874 850 ntBASIC7.26□□□□□ -1.25
NUP98P52948 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.26□□□□□ -1.25
NUP98P52948 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.26□□□□□ -1.25
NUP98P52948 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7.26□□□□□ -1.25
NUP98P52948 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.26□□□□□ -1.25
NUP98P52948 AC024940.4-201ENST00000605507 246 ntBASIC7.26□□□□□ -1.25
NUP98P52948 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.26□□□□□ -1.25
NUP98P52948 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC7.26□□□□□ -1.25
NUP98P52948 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NUP98P52948 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NUP98P52948 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NUP98P52948 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NUP98P52948 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.26□□□□□ -1.25
NUP98P52948 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NUP98P52948 ALB-209ENST00000503124 1741 ntTSL 5 BASIC7.26□□□□□ -1.25
NUP98P52948 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NUP98P52948 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NUP98P52948 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUP98P52948 AP003170.5-201ENST00000397185 335 ntBASIC7.25□□□□□ -1.25
NUP98P52948 AC016027.5-201ENST00000427227 210 ntBASIC7.25□□□□□ -1.25
NUP98P52948 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.25□□□□□ -1.25
NUP98P52948 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC7.25□□□□□ -1.25
NUP98P52948 CT45A11P-201ENST00000448043 1134 ntBASIC7.25□□□□□ -1.25
NUP98P52948 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.25□□□□□ -1.25
NUP98P52948 AC021146.10-201ENST00000515628 706 ntBASIC7.25□□□□□ -1.25
NUP98P52948 RN7SKP98-201ENST00000517070 156 ntBASIC7.25□□□□□ -1.25
NUP98P52948 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.25□□□□□ -1.25
NUP98P52948 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
NUP98P52948 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUP98P52948 AC087516.1-201ENST00000561236 2428 ntBASIC7.25□□□□□ -1.25
NUP98P52948 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.25□□□□□ -1.25
NUP98P52948 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUP98P52948 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.25□□□□□ -1.25
NUP98P52948 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NUP98P52948 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
NUP98P52948 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUP98P52948 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUP98P52948 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUP98P52948 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC7.24□□□□□ -1.25
NUP98P52948 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.24□□□□□ -1.25
NUP98P52948 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.24□□□□□ -1.25
NUP98P52948 AC007562.1-201ENST00000421819 517 ntBASIC7.24□□□□□ -1.25
NUP98P52948 AC023274.2-201ENST00000445264 521 ntBASIC7.24□□□□□ -1.25
NUP98P52948 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NUP98P52948 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC7.24□□□□□ -1.25
NUP98P52948 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.24□□□□□ -1.25
NUP98P52948 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
NUP98P52948 AL049779.3-201ENST00000557141 606 ntBASIC7.24□□□□□ -1.25
NUP98P52948 MIR4301-201ENST00000577203 66 ntBASIC7.24□□□□□ -1.25
NUP98P52948 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.24□□□□□ -1.25
NUP98P52948 AC068870.2-201ENST00000620635 389 ntBASIC7.24□□□□□ -1.25
NUP98P52948 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NUP98P52948 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
NUP98P52948 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.24□□□□□ -1.25
NUP98P52948 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NUP98P52948 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
NUP98P52948 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NUP98P52948 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NUP98P52948 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NUP98P52948 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.24□□□□□ -1.25
NUP98P52948 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
NUP98P52948 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NUP98P52948 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NUP98P52948 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.24□□□□□ -1.25
NUP98P52948 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.24□□□□□ -1.25
NUP98P52948 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.24□□□□□ -1.25
NUP98P52948 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NUP98P52948 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC7.24□□□□□ -1.25
NUP98P52948 AC008171.1-201ENST00000395058 200 ntBASIC7.24□□□□□ -1.25
NUP98P52948 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.24□□□□□ -1.25
NUP98P52948 CYCSP6-201ENST00000434498 302 ntBASIC7.24□□□□□ -1.25
NUP98P52948 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.24□□□□□ -1.25
NUP98P52948 RNA5SP92-201ENST00000516437 110 ntBASIC7.24□□□□□ -1.25
NUP98P52948 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.24□□□□□ -1.25
NUP98P52948 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.24□□□□□ -1.25
NUP98P52948 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.24□□□□□ -1.25
NUP98P52948 SDR42E1P1-201ENST00000611327 477 ntBASIC7.24□□□□□ -1.25
NUP98P52948 AL118522.2-201ENST00000616045 615 ntBASIC7.24□□□□□ -1.25
NUP98P52948 AP001885.1-201ENST00000621658 558 ntBASIC7.24□□□□□ -1.25
NUP98P52948 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NUP98P52948 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NUP98P52948 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms