Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RNFT1P3-201ENST00000340898 1052 ntBASIC5.99□□□□□ -1.45
PDX1P52945 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDX1P52945 RN7SKP292-201ENST00000365522 317 ntBASIC5.99□□□□□ -1.45
PDX1P52945 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PDX1P52945 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.99□□□□□ -1.45
PDX1P52945 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PDX1P52945 AC240504.1-201ENST00000395709 845 ntBASIC5.99□□□□□ -1.45
PDX1P52945 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PDX1P52945 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.99□□□□□ -1.45
PDX1P52945 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.99□□□□□ -1.45
PDX1P52945 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.99□□□□□ -1.45
PDX1P52945 AL355355.1-201ENST00000442900 793 ntBASIC5.99□□□□□ -1.45
PDX1P52945 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.99□□□□□ -1.45
PDX1P52945 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.99□□□□□ -1.45
PDX1P52945 RPL31P15-201ENST00000449770 338 ntBASIC5.99□□□□□ -1.45
PDX1P52945 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.99□□□□□ -1.45
PDX1P52945 UBFD1P1-201ENST00000473259 814 ntBASIC5.99□□□□□ -1.45
PDX1P52945 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.99□□□□□ -1.45
PDX1P52945 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.99□□□□□ -1.45
PDX1P52945 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
PDX1P52945 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.99□□□□□ -1.45
PDX1P52945 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.99□□□□□ -1.45
PDX1P52945 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.99□□□□□ -1.45
PDX1P52945 IGKV1D-22-201ENST00000518953 324 ntBASIC5.99□□□□□ -1.45
PDX1P52945 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.99□□□□□ -1.45
PDX1P52945 RPA2P1-201ENST00000556557 721 ntBASIC5.99□□□□□ -1.45
PDX1P52945 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.99□□□□□ -1.45
PDX1P52945 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.99□□□□□ -1.45
PDX1P52945 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.99□□□□□ -1.45
PDX1P52945 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.99□□□□□ -1.45
PDX1P52945 NPIPB1P-202ENST00000588786 828 ntBASIC5.99□□□□□ -1.45
PDX1P52945 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
PDX1P52945 FAM72A-208ENST00000607379 1139 ntBASIC5.99□□□□□ -1.45
PDX1P52945 AL008723.3-201ENST00000608926 449 ntBASIC5.99□□□□□ -1.45
PDX1P52945 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.99□□□□□ -1.45
PDX1P52945 MIR7159-201ENST00000620587 66 ntBASIC5.99□□□□□ -1.45
PDX1P52945 AC127024.6-201ENST00000621598 424 ntBASIC5.99□□□□□ -1.45
PDX1P52945 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.99□□□□□ -1.45
PDX1P52945 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDX1P52945 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.99□□□□□ -1.45
PDX1P52945 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
PDX1P52945 AC073488.3-201ENST00000631611 778 ntBASIC5.99□□□□□ -1.45
PDX1P52945 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDX1P52945 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PDX1P52945 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDX1P52945 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.99□□□□□ -1.45
PDX1P52945 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.99□□□□□ -1.45
PDX1P52945 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDX1P52945 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDX1P52945 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDX1P52945 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDX1P52945 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
PDX1P52945 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.99□□□□□ -1.45
PDX1P52945 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.99□□□□□ -1.45
PDX1P52945 PSG10P-201ENST00000501199 1500 ntBASIC5.99□□□□□ -1.45
PDX1P52945 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDX1P52945 AL117378.2-201ENST00000622916 1337 ntBASIC5.99□□□□□ -1.45
PDX1P52945 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDX1P52945 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
PDX1P52945 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.98□□□□□ -1.45
PDX1P52945 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
PDX1P52945 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.98□□□□□ -1.45
PDX1P52945 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.98□□□□□ -1.45
PDX1P52945 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.98□□□□□ -1.45
PDX1P52945 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.98□□□□□ -1.45
PDX1P52945 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.98□□□□□ -1.45
PDX1P52945 TMSB4XP2-201ENST00000335179 210 ntBASIC5.98□□□□□ -1.45
PDX1P52945 RNU1-134P-201ENST00000362935 165 ntBASIC5.98□□□□□ -1.45
PDX1P52945 RNU1-49P-201ENST00000363468 159 ntBASIC5.98□□□□□ -1.45
PDX1P52945 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.98□□□□□ -1.45
PDX1P52945 AL096711.1-201ENST00000404780 554 ntBASIC5.98□□□□□ -1.45
PDX1P52945 U3.43-201ENST00000410734 213 ntBASIC5.98□□□□□ -1.45
PDX1P52945 Z68694.1-201ENST00000413929 841 ntBASIC5.98□□□□□ -1.45
PDX1P52945 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.98□□□□□ -1.45
PDX1P52945 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.98□□□□□ -1.45
PDX1P52945 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.98□□□□□ -1.45
PDX1P52945 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.98□□□□□ -1.45
PDX1P52945 OR3D1P-201ENST00000438288 955 ntBASIC5.98□□□□□ -1.45
PDX1P52945 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.98□□□□□ -1.45
PDX1P52945 AC009237.1-201ENST00000442127 744 ntBASIC5.98□□□□□ -1.45
PDX1P52945 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDX1P52945 VN1R38P-201ENST00000450265 887 ntBASIC5.98□□□□□ -1.45
PDX1P52945 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDX1P52945 FTH1P8-201ENST00000498161 514 ntBASIC5.98□□□□□ -1.45
PDX1P52945 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.98□□□□□ -1.45
PDX1P52945 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.98□□□□□ -1.45
PDX1P52945 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.98□□□□□ -1.45
PDX1P52945 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.98□□□□□ -1.45
PDX1P52945 IGHV1-14-201ENST00000523391 241 ntBASIC5.98□□□□□ -1.45
PDX1P52945 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.98□□□□□ -1.45
PDX1P52945 AP005639.1-201ENST00000526939 192 ntBASIC5.98□□□□□ -1.45
PDX1P52945 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.98□□□□□ -1.45
PDX1P52945 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.98□□□□□ -1.45
PDX1P52945 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.98□□□□□ -1.45
PDX1P52945 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.98□□□□□ -1.45
PDX1P52945 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.98□□□□□ -1.45
PDX1P52945 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.98□□□□□ -1.45
PDX1P52945 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.98□□□□□ -1.45
PDX1P52945 MIR6768-201ENST00000610734 72 ntBASIC5.98□□□□□ -1.45
PDX1P52945 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms