Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
COL15A1P39059 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
COL15A1P39059 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
COL15A1P39059 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
COL15A1P39059 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.64□□□□□ -1.19
COL15A1P39059 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
COL15A1P39059 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
COL15A1P39059 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL15A1P39059 RNA5SP46-201ENST00000362370 120 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 RNA5SP375-201ENST00000362975 119 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 RN7SKP128-201ENST00000364270 303 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 HMGB1P20-201ENST00000402555 677 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 NMD3P2-201ENST00000421815 761 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 AL355433.1-201ENST00000422804 300 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.64□□□□□ -1.19
COL15A1P39059 RPL23AP60-201ENST00000450011 454 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.64□□□□□ -1.19
COL15A1P39059 RPS23P6-201ENST00000466136 431 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 EIF3LP3-201ENST00000495197 822 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 AC023818.1-201ENST00000498379 384 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.64□□□□□ -1.19
COL15A1P39059 IGKV2-18-201ENST00000522607 343 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 OR56A7P-201ENST00000524865 941 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 HMGN2P36-201ENST00000529541 409 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC7.64□□□□□ -1.19
COL15A1P39059 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.64□□□□□ -1.19
COL15A1P39059 AC119403.2-201ENST00000590960 598 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 AC020916.2-201ENST00000591242 360 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.64□□□□□ -1.19
COL15A1P39059 MIR6798-201ENST00000612887 67 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.64□□□□□ -1.19
COL15A1P39059 AL139805.2-201ENST00000455305 2433 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 AL353763.1-201ENST00000624467 1628 ntBASIC7.64□□□□□ -1.19
COL15A1P39059 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.64□□□□□ -1.19
COL15A1P39059 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
COL15A1P39059 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
COL15A1P39059 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
COL15A1P39059 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL15A1P39059 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.63□□□□□ -1.19
COL15A1P39059 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL15A1P39059 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
COL15A1P39059 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL15A1P39059 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
COL15A1P39059 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
COL15A1P39059 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL15A1P39059 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL15A1P39059 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
COL15A1P39059 SNORD8-201ENST00000363915 110 ntBASIC7.63□□□□□ -1.19
COL15A1P39059 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
COL15A1P39059 BMS1P17-202ENST00000416720 316 ntBASIC7.63□□□□□ -1.19
COL15A1P39059 AK4P4-201ENST00000419465 646 ntBASIC7.63□□□□□ -1.19
COL15A1P39059 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.63□□□□□ -1.19
COL15A1P39059 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL15A1P39059 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.63□□□□□ -1.19
COL15A1P39059 AC126120.1-201ENST00000431082 470 ntBASIC7.63□□□□□ -1.19
COL15A1P39059 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.63□□□□□ -1.19
COL15A1P39059 AC093166.4-201ENST00000457867 318 ntBASIC7.63□□□□□ -1.19
COL15A1P39059 RN7SL799P-201ENST00000475891 298 ntBASIC7.63□□□□□ -1.19
COL15A1P39059 RN7SL57P-201ENST00000493687 290 ntBASIC7.63□□□□□ -1.19
COL15A1P39059 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.63□□□□□ -1.19
COL15A1P39059 AC138866.2-201ENST00000508650 584 ntBASIC7.63□□□□□ -1.19
COL15A1P39059 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.63□□□□□ -1.19
COL15A1P39059 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
COL15A1P39059 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.63□□□□□ -1.19
COL15A1P39059 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.63□□□□□ -1.19
COL15A1P39059 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.63□□□□□ -1.19
COL15A1P39059 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.63□□□□□ -1.19
COL15A1P39059 AC090651.1-201ENST00000567865 634 ntBASIC7.63□□□□□ -1.19
COL15A1P39059 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.63□□□□□ -1.19
COL15A1P39059 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.63□□□□□ -1.19
COL15A1P39059 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL15A1P39059 AC005229.3-201ENST00000603438 323 ntBASIC7.63□□□□□ -1.19
COL15A1P39059 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.63□□□□□ -1.19
COL15A1P39059 AL354950.1-201ENST00000614150 568 ntBASIC7.63□□□□□ -1.19
COL15A1P39059 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL15A1P39059 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.63□□□□□ -1.19
COL15A1P39059 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
COL15A1P39059 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL15A1P39059 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.63□□□□□ -1.19
COL15A1P39059 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
COL15A1P39059 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
COL15A1P39059 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
COL15A1P39059 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL15A1P39059 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL15A1P39059 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.62□□□□□ -1.19
COL15A1P39059 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
COL15A1P39059 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL15A1P39059 RNA5SP394-201ENST00000364216 119 ntBASIC7.62□□□□□ -1.19
COL15A1P39059 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
COL15A1P39059 MIR937-201ENST00000401271 86 ntBASIC7.62□□□□□ -1.19
COL15A1P39059 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.62□□□□□ -1.19
COL15A1P39059 HMGA1P8-201ENST00000414130 321 ntBASIC7.62□□□□□ -1.19
COL15A1P39059 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.62□□□□□ -1.19
COL15A1P39059 PTCD2P2-201ENST00000415579 1095 ntBASIC7.62□□□□□ -1.19
COL15A1P39059 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.62□□□□□ -1.19
COL15A1P39059 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.62□□□□□ -1.19
COL15A1P39059 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC7.62□□□□□ -1.19
COL15A1P39059 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.62□□□□□ -1.19
COL15A1P39059 AC012497.1-201ENST00000429392 575 ntBASIC7.62□□□□□ -1.19
COL15A1P39059 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms