Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.86□□□□□ -1.31
CIITAP33076 AL445466.1-201ENST00000448432 357 ntBASIC6.86□□□□□ -1.31
CIITAP33076 AC005077.1-201ENST00000449226 375 ntBASIC6.86□□□□□ -1.31
CIITAP33076 RAB28P2-201ENST00000454299 641 ntBASIC6.86□□□□□ -1.31
CIITAP33076 AC098847.1-201ENST00000473094 348 ntBASIC6.86□□□□□ -1.31
CIITAP33076 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CIITAP33076 AC008945.1-201ENST00000505144 499 ntBASIC6.86□□□□□ -1.31
CIITAP33076 AC025458.1-201ENST00000506046 166 ntBASIC6.86□□□□□ -1.31
CIITAP33076 RN7SKP238-201ENST00000516483 249 ntBASIC6.86□□□□□ -1.31
CIITAP33076 TPM3P3-201ENST00000521343 354 ntBASIC6.86□□□□□ -1.31
CIITAP33076 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.86□□□□□ -1.31
CIITAP33076 AC027369.2-201ENST00000528030 440 ntBASIC6.86□□□□□ -1.31
CIITAP33076 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.86□□□□□ -1.31
CIITAP33076 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.86□□□□□ -1.31
CIITAP33076 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.86□□□□□ -1.31
CIITAP33076 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.86□□□□□ -1.31
CIITAP33076 AC005244.1-201ENST00000582566 339 ntBASIC6.86□□□□□ -1.31
CIITAP33076 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.86□□□□□ -1.31
CIITAP33076 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.86□□□□□ -1.31
CIITAP33076 AC079315.1-201ENST00000602952 623 ntBASIC6.86□□□□□ -1.31
CIITAP33076 AL133445.2-201ENST00000611191 527 ntBASIC6.86□□□□□ -1.31
CIITAP33076 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.86□□□□□ -1.31
CIITAP33076 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CIITAP33076 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CIITAP33076 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.86□□□□□ -1.31
CIITAP33076 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.86□□□□□ -1.31
CIITAP33076 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
CIITAP33076 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CIITAP33076 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CIITAP33076 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CIITAP33076 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CIITAP33076 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.86□□□□□ -1.31
CIITAP33076 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CIITAP33076 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.86□□□□□ -1.31
CIITAP33076 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
CIITAP33076 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CIITAP33076 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
CIITAP33076 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.85□□□□□ -1.31
CIITAP33076 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.85□□□□□ -1.31
CIITAP33076 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CIITAP33076 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CIITAP33076 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CIITAP33076 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CIITAP33076 SNORA70H-201ENST00000383910 135 ntBASIC6.85□□□□□ -1.31
CIITAP33076 SNORA70J-201ENST00000384182 135 ntBASIC6.85□□□□□ -1.31
CIITAP33076 RN7SKP166-201ENST00000410812 305 ntBASIC6.85□□□□□ -1.31
CIITAP33076 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.85□□□□□ -1.31
CIITAP33076 RPS17P17-201ENST00000419392 409 ntBASIC6.85□□□□□ -1.31
CIITAP33076 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CIITAP33076 AL138899.2-201ENST00000439139 499 ntBASIC6.85□□□□□ -1.31
CIITAP33076 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.85□□□□□ -1.31
CIITAP33076 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.85□□□□□ -1.31
CIITAP33076 HMGN1P2-201ENST00000445197 310 ntBASIC6.85□□□□□ -1.31
CIITAP33076 RPL5P10-201ENST00000445207 894 ntBASIC6.85□□□□□ -1.31
CIITAP33076 AC017099.1-201ENST00000448261 1028 ntBASIC6.85□□□□□ -1.31
CIITAP33076 RN7SL269P-201ENST00000467795 305 ntBASIC6.85□□□□□ -1.31
CIITAP33076 RPL23AP40-201ENST00000487630 390 ntBASIC6.85□□□□□ -1.31
CIITAP33076 AL035690.1-201ENST00000490892 383 ntBASIC6.85□□□□□ -1.31
CIITAP33076 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.85□□□□□ -1.31
CIITAP33076 OR56A7P-201ENST00000524865 941 ntBASIC6.85□□□□□ -1.31
CIITAP33076 TRIM77BP-201ENST00000524985 1119 ntBASIC6.85□□□□□ -1.31
CIITAP33076 AC110056.1-201ENST00000525759 911 ntBASIC6.85□□□□□ -1.31
CIITAP33076 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.85□□□□□ -1.31
CIITAP33076 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC6.85□□□□□ -1.31
CIITAP33076 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.85□□□□□ -1.31
CIITAP33076 AC090888.3-201ENST00000558917 509 ntBASIC6.85□□□□□ -1.31
CIITAP33076 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC6.85□□□□□ -1.31
CIITAP33076 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.85□□□□□ -1.31
CIITAP33076 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.85□□□□□ -1.31
CIITAP33076 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.85□□□□□ -1.31
CIITAP33076 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
CIITAP33076 AF117829.2-201ENST00000619538 361 ntBASIC6.85□□□□□ -1.31
CIITAP33076 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.85□□□□□ -1.31
CIITAP33076 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.85□□□□□ -1.31
CIITAP33076 AC096708.4-201ENST00000620563 552 ntBASIC6.85□□□□□ -1.31
CIITAP33076 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CIITAP33076 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CIITAP33076 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.85□□□□□ -1.31
CIITAP33076 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CIITAP33076 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
CIITAP33076 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CIITAP33076 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CIITAP33076 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.85□□□□□ -1.31
CIITAP33076 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CIITAP33076 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CIITAP33076 AC009135.2-201ENST00000624136 1768 ntBASIC6.85□□□□□ -1.31
CIITAP33076 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CIITAP33076 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CIITAP33076 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CIITAP33076 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
CIITAP33076 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.84□□□□□ -1.31
CIITAP33076 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.84□□□□□ -1.31
CIITAP33076 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.31
CIITAP33076 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.84□□□□□ -1.31
CIITAP33076 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CIITAP33076 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CIITAP33076 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CIITAP33076 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CIITAP33076 NPM1P10-201ENST00000398310 865 ntBASIC6.84□□□□□ -1.31
CIITAP33076 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms