Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
PTPRMP28827 AC104447.1-201ENST00000624214 2124 ntBASIC8.62□□□□□ -1.03
PTPRMP28827 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
PTPRMP28827 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
PTPRMP28827 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC8.62□□□□□ -1.03
PTPRMP28827 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PTPRMP28827 RBMY2QP-201ENST00000429799 1147 ntBASIC8.62□□□□□ -1.03
PTPRMP28827 AC092647.3-201ENST00000443044 633 ntBASIC8.62□□□□□ -1.03
PTPRMP28827 AC092324.1-201ENST00000468671 324 ntBASIC8.62□□□□□ -1.03
PTPRMP28827 AC096741.1-201ENST00000472250 846 ntBASIC8.62□□□□□ -1.03
PTPRMP28827 AC020898.1-201ENST00000474167 787 ntBASIC8.62□□□□□ -1.03
PTPRMP28827 RN7SL205P-201ENST00000490174 284 ntBASIC8.62□□□□□ -1.03
PTPRMP28827 RPEP1-201ENST00000504507 658 ntBASIC8.62□□□□□ -1.03
PTPRMP28827 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC8.62□□□□□ -1.03
PTPRMP28827 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC8.62□□□□□ -1.03
PTPRMP28827 IGHVIII-13-1-201ENST00000517613 291 ntBASIC8.62□□□□□ -1.03
PTPRMP28827 RNU4ATAC-201ENST00000580972 127 ntBASIC8.62□□□□□ -1.03
PTPRMP28827 SS18L2P2-201ENST00000583960 235 ntBASIC8.62□□□□□ -1.03
PTPRMP28827 RN7SL52P-201ENST00000584271 284 ntBASIC8.62□□□□□ -1.03
PTPRMP28827 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC8.62□□□□□ -1.03
PTPRMP28827 RN7SL722P-201ENST00000617780 284 ntBASIC8.62□□□□□ -1.03
PTPRMP28827 RN7SL565P-201ENST00000618246 284 ntBASIC8.62□□□□□ -1.03
PTPRMP28827 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PTPRMP28827 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PTPRMP28827 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.62□□□□□ -1.03
PTPRMP28827 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PTPRMP28827 AC022893.2-201ENST00000564832 3296 ntBASIC8.62□□□□□ -1.03
PTPRMP28827 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPRMP28827 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PTPRMP28827 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC8.61□□□□□ -1.03
PTPRMP28827 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PTPRMP28827 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPRMP28827 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
PTPRMP28827 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.61□□□□□ -1.03
PTPRMP28827 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPRMP28827 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC8.61□□□□□ -1.03
PTPRMP28827 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC8.61□□□□□ -1.03
PTPRMP28827 CYP4F30P-202ENST00000420048 405 ntBASIC8.61□□□□□ -1.03
PTPRMP28827 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC8.61□□□□□ -1.03
PTPRMP28827 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC8.61□□□□□ -1.03
PTPRMP28827 MGAT2P1-201ENST00000449718 797 ntBASIC8.61□□□□□ -1.03
PTPRMP28827 AL389915.2-201ENST00000454576 441 ntBASIC8.61□□□□□ -1.03
PTPRMP28827 RPS3AP53-201ENST00000454716 778 ntBASIC8.61□□□□□ -1.03
PTPRMP28827 AC104164.1-201ENST00000460282 590 ntBASIC8.61□□□□□ -1.03
PTPRMP28827 C1GALT1P3-201ENST00000522049 819 ntBASIC8.61□□□□□ -1.03
PTPRMP28827 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC8.61□□□□□ -1.03
PTPRMP28827 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC8.61□□□□□ -1.03
PTPRMP28827 MIR3934-201ENST00000579806 107 ntBASIC8.61□□□□□ -1.03
PTPRMP28827 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
PTPRMP28827 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC8.61□□□□□ -1.03
PTPRMP28827 AC016717.3-201ENST00000624730 554 ntBASIC8.61□□□□□ -1.03
PTPRMP28827 OR11H2-202ENST00000641517 1085 ntBASIC8.61□□□□□ -1.03
PTPRMP28827 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
PTPRMP28827 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPRMP28827 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PTPRMP28827 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC8.61□□□□□ -1.03
PTPRMP28827 ZNF733P-202ENST00000444809 1573 ntBASIC8.61□□□□□ -1.03
PTPRMP28827 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.61□□□□□ -1.03
PTPRMP28827 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPRMP28827 AC013488.1-201ENST00000526618 1838 ntBASIC8.61□□□□□ -1.03
PTPRMP28827 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTPRMP28827 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
PTPRMP28827 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC8.6□□□□□ -1.03
PTPRMP28827 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC8.6□□□□□ -1.03
PTPRMP28827 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC8.6□□□□□ -1.03
PTPRMP28827 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC8.6□□□□□ -1.03
PTPRMP28827 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTPRMP28827 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
PTPRMP28827 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTPRMP28827 RN7SKP104-201ENST00000362605 328 ntBASIC8.6□□□□□ -1.03
PTPRMP28827 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC8.6□□□□□ -1.03
PTPRMP28827 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
PTPRMP28827 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC8.6□□□□□ -1.03
PTPRMP28827 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC8.6□□□□□ -1.03
PTPRMP28827 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC8.6□□□□□ -1.03
PTPRMP28827 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC8.6□□□□□ -1.03
PTPRMP28827 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC8.6□□□□□ -1.03
PTPRMP28827 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC8.6□□□□□ -1.03
PTPRMP28827 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC8.6□□□□□ -1.03
PTPRMP28827 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC8.6□□□□□ -1.03
PTPRMP28827 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PTPRMP28827 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
PTPRMP28827 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC8.6□□□□□ -1.03
PTPRMP28827 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC8.6□□□□□ -1.03
PTPRMP28827 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PTPRMP28827 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTPRMP28827 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.6□□□□□ -1.03
PTPRMP28827 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
PTPRMP28827 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PTPRMP28827 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PTPRMP28827 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC8.6□□□□□ -1.03
PTPRMP28827 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
PTPRMP28827 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTPRMP28827 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTPRMP28827 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PTPRMP28827 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
PTPRMP28827 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTPRMP28827 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC8.59□□□□□ -1.03
PTPRMP28827 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PTPRMP28827 RMST-210ENST00000640149 2844 ntTSL 5 BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms