Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VARSP26640 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
VARSP26640 OR8B9P-202ENST00000642028 5216 ntBASIC8.01□□□□□ -1.13
VARSP26640 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
VARSP26640 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC8.01□□□□□ -1.13
VARSP26640 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
VARSP26640 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
VARSP26640 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC8□□□□□ -1.13
VARSP26640 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
VARSP26640 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8□□□□□ -1.13
VARSP26640 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC8□□□□□ -1.13
VARSP26640 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 ADGRF2-201ENST00000296862 2127 ntTSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8□□□□□ -1.13
VARSP26640 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 GANC-206ENST00000566442 2512 ntTSL 2 BASIC8□□□□□ -1.13
VARSP26640 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8□□□□□ -1.13
VARSP26640 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC8□□□□□ -1.13
VARSP26640 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
VARSP26640 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 AL080312.1-201ENST00000256654 824 ntBASIC8□□□□□ -1.13
VARSP26640 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 METTL21EP-201ENST00000298105 713 ntBASIC8□□□□□ -1.13
VARSP26640 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC8□□□□□ -1.13
VARSP26640 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC8□□□□□ -1.13
VARSP26640 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC8□□□□□ -1.13
VARSP26640 RNA5SP71-201ENST00000362967 126 ntBASIC8□□□□□ -1.13
VARSP26640 RNU6-254P-201ENST00000363377 107 ntBASIC8□□□□□ -1.13
VARSP26640 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 RNU6-907P-201ENST00000390924 102 ntBASIC8□□□□□ -1.13
VARSP26640 PPIAP2-201ENST00000414143 492 ntBASIC8□□□□□ -1.13
VARSP26640 LINC00426-202ENST00000417079 1045 ntTSL 3 BASIC8□□□□□ -1.13
VARSP26640 USP9YP13-201ENST00000417797 480 ntBASIC8□□□□□ -1.13
VARSP26640 EEF1A1P34-201ENST00000419888 1267 ntBASIC8□□□□□ -1.13
VARSP26640 RPL7P44-201ENST00000424827 742 ntBASIC8□□□□□ -1.13
VARSP26640 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC8□□□□□ -1.13
VARSP26640 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8□□□□□ -1.13
VARSP26640 FAM96AP1-201ENST00000430879 482 ntBASIC8□□□□□ -1.13
VARSP26640 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC8□□□□□ -1.13
VARSP26640 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC8□□□□□ -1.13
VARSP26640 NDUFB4P1-201ENST00000462398 381 ntBASIC8□□□□□ -1.13
VARSP26640 RPSAP39-201ENST00000467439 883 ntBASIC8□□□□□ -1.13
VARSP26640 RN7SL496P-201ENST00000470372 290 ntBASIC8□□□□□ -1.13
VARSP26640 AP000797.1-201ENST00000478870 387 ntBASIC8□□□□□ -1.13
VARSP26640 RPS29P25-201ENST00000481709 171 ntBASIC8□□□□□ -1.13
VARSP26640 FGF7P4-201ENST00000509595 295 ntBASIC8□□□□□ -1.13
VARSP26640 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC8□□□□□ -1.13
VARSP26640 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC8□□□□□ -1.13
VARSP26640 AC105914.1-201ENST00000511798 226 ntBASIC8□□□□□ -1.13
VARSP26640 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 Y_RNA.704-201ENST00000516851 102 ntBASIC8□□□□□ -1.13
VARSP26640 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC8□□□□□ -1.13
VARSP26640 IGKV2D-14-201ENST00000522473 355 ntBASIC8□□□□□ -1.13
VARSP26640 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC8□□□□□ -1.13
VARSP26640 AP002957.1-201ENST00000525952 406 ntTSL 3 BASIC8□□□□□ -1.13
VARSP26640 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC8□□□□□ -1.13
VARSP26640 EGLN3P1-201ENST00000541727 720 ntBASIC8□□□□□ -1.13
VARSP26640 CBX3P5-201ENST00000552017 521 ntBASIC8□□□□□ -1.13
VARSP26640 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC8□□□□□ -1.13
VARSP26640 AC010487.1-201ENST00000594408 1172 ntBASIC8□□□□□ -1.13
VARSP26640 AL356052.1-201ENST00000605764 376 ntBASIC8□□□□□ -1.13
VARSP26640 AC116312.1-201ENST00000606841 314 ntBASIC8□□□□□ -1.13
VARSP26640 AC024560.3-201ENST00000608482 349 ntBASIC8□□□□□ -1.13
VARSP26640 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC8□□□□□ -1.13
VARSP26640 AL356095.2-201ENST00000624025 457 ntBASIC8□□□□□ -1.13
VARSP26640 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC8□□□□□ -1.13
VARSP26640 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC8□□□□□ -1.13
VARSP26640 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC8□□□□□ -1.13
VARSP26640 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC8□□□□□ -1.13
VARSP26640 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 RARSP1-201ENST00000542842 1418 ntBASIC8□□□□□ -1.13
VARSP26640 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
VARSP26640 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 AC002540.1-201ENST00000625023 1349 ntBASIC8□□□□□ -1.13
VARSP26640 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
VARSP26640 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
VARSP26640 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
VARSP26640 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC8□□□□□ -1.13
VARSP26640 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.99□□□□□ -1.13
VARSP26640 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.99□□□□□ -1.13
VARSP26640 AC245505.2-201ENST00000553572 3055 ntBASIC7.99□□□□□ -1.13
VARSP26640 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.99□□□□□ -1.13
VARSP26640 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC7.99□□□□□ -1.13
VARSP26640 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 MTCO1P11-201ENST00000429111 1528 ntBASIC7.99□□□□□ -1.13
VARSP26640 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms