Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TNFSF4P23510 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.88□□□□□ -1.47
TNFSF4P23510 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.88□□□□□ -1.47
TNFSF4P23510 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TNFSF4P23510 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.88□□□□□ -1.47
TNFSF4P23510 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.88□□□□□ -1.47
TNFSF4P23510 MIR4675-201ENST00000577898 77 ntBASIC5.88□□□□□ -1.47
TNFSF4P23510 MIR4428-201ENST00000584884 73 ntBASIC5.88□□□□□ -1.47
TNFSF4P23510 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.88□□□□□ -1.47
TNFSF4P23510 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.88□□□□□ -1.47
TNFSF4P23510 AC034229.4-201ENST00000607861 441 ntBASIC5.88□□□□□ -1.47
TNFSF4P23510 AC027449.1-201ENST00000608890 407 ntBASIC5.88□□□□□ -1.47
TNFSF4P23510 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.88□□□□□ -1.47
TNFSF4P23510 MIR6883-201ENST00000614952 78 ntBASIC5.88□□□□□ -1.47
TNFSF4P23510 U1.31-201ENST00000620022 160 ntBASIC5.88□□□□□ -1.47
TNFSF4P23510 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.88□□□□□ -1.47
TNFSF4P23510 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.88□□□□□ -1.47
TNFSF4P23510 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC5.88□□□□□ -1.47
TNFSF4P23510 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TNFSF4P23510 AL627171.1-201ENST00000618845 1308 ntBASIC5.88□□□□□ -1.47
TNFSF4P23510 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TNFSF4P23510 AC017007.4-201ENST00000503353 1352 ntBASIC5.88□□□□□ -1.47
TNFSF4P23510 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
TNFSF4P23510 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TNFSF4P23510 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC5.88□□□□□ -1.47
TNFSF4P23510 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC5.88□□□□□ -1.47
TNFSF4P23510 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TNFSF4P23510 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TNFSF4P23510 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TNFSF4P23510 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
TNFSF4P23510 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TNFSF4P23510 AL606537.1-201ENST00000607258 2011 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 AC011815.2-201ENST00000618230 2021 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 AC016745.2-201ENST00000608834 3443 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
TNFSF4P23510 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC5.87□□□□□ -1.47
TNFSF4P23510 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TNFSF4P23510 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC5.87□□□□□ -1.47
TNFSF4P23510 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 RNA5SP176-201ENST00000390956 110 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.87□□□□□ -1.47
TNFSF4P23510 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.87□□□□□ -1.47
TNFSF4P23510 AL672212.1-201ENST00000422246 400 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.87□□□□□ -1.47
TNFSF4P23510 GAPDHP57-201ENST00000424400 585 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.87□□□□□ -1.47
TNFSF4P23510 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.87□□□□□ -1.47
TNFSF4P23510 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.87□□□□□ -1.47
TNFSF4P23510 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC5.87□□□□□ -1.47
TNFSF4P23510 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.87□□□□□ -1.47
TNFSF4P23510 MYO5BP3-201ENST00000431872 1279 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 AC092447.2-201ENST00000435487 669 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.87□□□□□ -1.47
TNFSF4P23510 AL353093.1-201ENST00000441292 436 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC5.87□□□□□ -1.47
TNFSF4P23510 WDR82P2-201ENST00000444540 928 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 HBG2-204ENST00000444587 307 ntTSL 2 BASIC5.87□□□□□ -1.47
TNFSF4P23510 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.87□□□□□ -1.47
TNFSF4P23510 AL390728.3-201ENST00000452704 270 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 NMNAT1P3-201ENST00000457517 888 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 RNU7-27P-201ENST00000459281 62 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 RN7SL390P-201ENST00000470634 284 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 PGBD4P1-201ENST00000473644 407 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.87□□□□□ -1.47
TNFSF4P23510 PPP1R2P6-201ENST00000478565 588 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.87□□□□□ -1.47
TNFSF4P23510 IGKV2D-38-201ENST00000518423 240 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.87□□□□□ -1.47
TNFSF4P23510 OR9L1P-201ENST00000529493 933 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 AP000619.2-201ENST00000546014 969 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 RN7SL339P-201ENST00000580597 296 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.87□□□□□ -1.47
TNFSF4P23510 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.87□□□□□ -1.47
TNFSF4P23510 AC091057.3-201ENST00000602684 733 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC5.87□□□□□ -1.47
TNFSF4P23510 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.87□□□□□ -1.47
TNFSF4P23510 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TNFSF4P23510 NEK2P4-201ENST00000425793 1329 ntBASIC5.87□□□□□ -1.47
TNFSF4P23510 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.87□□□□□ -1.47
TNFSF4P23510 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.87□□□□□ -1.47
TNFSF4P23510 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TNFSF4P23510 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TNFSF4P23510 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
TNFSF4P23510 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms