Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.78□□□□□ -1.64
CD28P10747 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC4.78□□□□□ -1.64
CD28P10747 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.78□□□□□ -1.64
CD28P10747 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.78□□□□□ -1.64
CD28P10747 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC4.78□□□□□ -1.64
CD28P10747 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.78□□□□□ -1.64
CD28P10747 AC233702.7-202ENST00000582941 211 ntBASIC4.78□□□□□ -1.64
CD28P10747 AC011445.2-201ENST00000599274 173 ntBASIC4.78□□□□□ -1.64
CD28P10747 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC4.78□□□□□ -1.64
CD28P10747 AC008555.7-201ENST00000605008 583 ntBASIC4.78□□□□□ -1.64
CD28P10747 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.78□□□□□ -1.64
CD28P10747 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CD28P10747 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.78□□□□□ -1.64
CD28P10747 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.78□□□□□ -1.64
CD28P10747 AC004836.1-201ENST00000623032 634 ntBASIC4.78□□□□□ -1.64
CD28P10747 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.78□□□□□ -1.64
CD28P10747 SNORA17.5-201ENST00000630429 132 ntBASIC4.78□□□□□ -1.64
CD28P10747 OR7A1P-202ENST00000641542 1158 ntBASIC4.78□□□□□ -1.64
CD28P10747 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CD28P10747 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.78□□□□□ -1.64
CD28P10747 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 ST7-203ENST00000393443 2360 ntTSL 2 BASIC4.78□□□□□ -1.64
CD28P10747 AC062029.1-202ENST00000606164 3651 ntBASIC4.78□□□□□ -1.64
CD28P10747 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC4.78□□□□□ -1.64
CD28P10747 AF287957.1-201ENST00000607368 1595 ntBASIC4.78□□□□□ -1.64
CD28P10747 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC4.78□□□□□ -1.64
CD28P10747 MAPK10-287ENST00000641217 3037 ntBASIC4.78□□□□□ -1.64
CD28P10747 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD28P10747 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CD28P10747 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CD28P10747 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD28P10747 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CD28P10747 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD28P10747 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC4.77□□□□□ -1.65
CD28P10747 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.77□□□□□ -1.65
CD28P10747 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CD28P10747 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CD28P10747 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC4.77□□□□□ -1.65
CD28P10747 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD28P10747 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD28P10747 OR52B3P-201ENST00000314715 928 ntBASIC4.77□□□□□ -1.65
CD28P10747 OR11H13P-201ENST00000359695 979 ntBASIC4.77□□□□□ -1.65
CD28P10747 SNORA70H-201ENST00000383910 135 ntBASIC4.77□□□□□ -1.65
CD28P10747 SNORA70J-201ENST00000384182 135 ntBASIC4.77□□□□□ -1.65
CD28P10747 RNA5SP284-201ENST00000384547 118 ntBASIC4.77□□□□□ -1.65
CD28P10747 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD28P10747 AL512422.1-201ENST00000407033 553 ntBASIC4.77□□□□□ -1.65
CD28P10747 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.77□□□□□ -1.65
CD28P10747 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.77□□□□□ -1.65
CD28P10747 MTND6P12-201ENST00000428247 522 ntBASIC4.77□□□□□ -1.65
CD28P10747 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.77□□□□□ -1.65
CD28P10747 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.77□□□□□ -1.65
CD28P10747 NXT1P1-201ENST00000458481 316 ntBASIC4.77□□□□□ -1.65
CD28P10747 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC4.77□□□□□ -1.65
CD28P10747 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CD28P10747 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC4.77□□□□□ -1.65
CD28P10747 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC4.77□□□□□ -1.65
CD28P10747 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.77□□□□□ -1.65
CD28P10747 AC073916.1-201ENST00000545095 130 ntBASIC4.77□□□□□ -1.65
CD28P10747 AC125612.1-201ENST00000547580 377 ntBASIC4.77□□□□□ -1.65
CD28P10747 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC4.77□□□□□ -1.65
CD28P10747 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CD28P10747 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.77□□□□□ -1.65
CD28P10747 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.77□□□□□ -1.65
CD28P10747 AC027229.1-201ENST00000583887 253 ntBASIC4.77□□□□□ -1.65
CD28P10747 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.77□□□□□ -1.65
CD28P10747 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.77□□□□□ -1.65
CD28P10747 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.77□□□□□ -1.65
CD28P10747 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC4.77□□□□□ -1.65
CD28P10747 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.77□□□□□ -1.65
CD28P10747 AL645933.2-201ENST00000606743 1207 ntBASIC4.77□□□□□ -1.65
CD28P10747 AP000894.4-201ENST00000610185 483 ntBASIC4.77□□□□□ -1.65
CD28P10747 AC127024.6-201ENST00000621598 424 ntBASIC4.77□□□□□ -1.65
CD28P10747 AL136228.1-201ENST00000622221 319 ntBASIC4.77□□□□□ -1.65
CD28P10747 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.77□□□□□ -1.65
CD28P10747 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC4.77□□□□□ -1.65
CD28P10747 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC4.77□□□□□ -1.65
CD28P10747 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CD28P10747 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CD28P10747 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.77□□□□□ -1.65
CD28P10747 AC092724.1-201ENST00000624623 3397 ntBASIC4.77□□□□□ -1.65
CD28P10747 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.77□□□□□ -1.65
CD28P10747 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD28P10747 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC4.77□□□□□ -1.65
CD28P10747 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC4.77□□□□□ -1.65
CD28P10747 AC024587.1-201ENST00000505925 2157 ntBASIC4.77□□□□□ -1.65
CD28P10747 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CD28P10747 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC4.77□□□□□ -1.65
CD28P10747 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.77□□□□□ -1.65
CD28P10747 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms