Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC188H7C350 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC188H7C350 OR10R3P-201ENST00000361688 942 ntBASIC6.23□□□□□ -1.41
CCDC188H7C350 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC188H7C350 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.23□□□□□ -1.41
CCDC188H7C350 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC188H7C350 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CCDC188H7C350 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC188H7C350 COX4I1P2-201ENST00000447446 547 ntBASIC6.23□□□□□ -1.41
CCDC188H7C350 RPL12P39-201ENST00000455456 496 ntBASIC6.23□□□□□ -1.41
CCDC188H7C350 AL354872.1-201ENST00000456361 967 ntBASIC6.23□□□□□ -1.41
CCDC188H7C350 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC188H7C350 AL603882.1-201ENST00000463059 681 ntBASIC6.23□□□□□ -1.41
CCDC188H7C350 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC188H7C350 RN7SL655P-201ENST00000486087 298 ntBASIC6.23□□□□□ -1.41
CCDC188H7C350 RN7SL104P-201ENST00000498686 293 ntBASIC6.23□□□□□ -1.41
CCDC188H7C350 AC009567.2-201ENST00000502989 349 ntBASIC6.23□□□□□ -1.41
CCDC188H7C350 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC188H7C350 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC188H7C350 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC188H7C350 OR56A7P-201ENST00000524865 941 ntBASIC6.23□□□□□ -1.41
CCDC188H7C350 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC188H7C350 OR9G2P-201ENST00000533326 880 ntBASIC6.23□□□□□ -1.41
CCDC188H7C350 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC188H7C350 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC188H7C350 AC090241.1-201ENST00000587732 621 ntBASIC6.23□□□□□ -1.41
CCDC188H7C350 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC188H7C350 uc_338.26-201ENST00000612659 160 ntBASIC6.23□□□□□ -1.41
CCDC188H7C350 AC015712.7-201ENST00000615211 635 ntBASIC6.23□□□□□ -1.41
CCDC188H7C350 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.23□□□□□ -1.41
CCDC188H7C350 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
CCDC188H7C350 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC188H7C350 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC188H7C350 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC188H7C350 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC188H7C350 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC188H7C350 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC188H7C350 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC188H7C350 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC188H7C350 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC188H7C350 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
CCDC188H7C350 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC188H7C350 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC188H7C350 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC188H7C350 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
CCDC188H7C350 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC188H7C350 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
CCDC188H7C350 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC188H7C350 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC188H7C350 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CCDC188H7C350 RNA5SP211-201ENST00000365516 117 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 AC092634.1-201ENST00000366505 199 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 AL157702.1-201ENST00000398764 426 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 AC003045.1-201ENST00000398779 713 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC188H7C350 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC188H7C350 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
CCDC188H7C350 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC188H7C350 AC096775.1-201ENST00000437724 448 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CCDC188H7C350 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC188H7C350 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC188H7C350 AC018639.1-201ENST00000492994 442 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 AC091917.2-201ENST00000505002 744 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 AP001960.1-201ENST00000506494 658 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 AC113398.2-201ENST00000507630 558 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC188H7C350 SNORD116-30-201ENST00000516468 85 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 RNA5SP206-201ENST00000516703 121 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC188H7C350 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC188H7C350 AC084851.2-201ENST00000530377 364 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 OR4A42P-201ENST00000531397 938 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 AC084824.2-201ENST00000548906 345 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC188H7C350 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC188H7C350 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC188H7C350 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC188H7C350 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC188H7C350 AP001823.1-201ENST00000604056 1003 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 AC023206.1-201ENST00000605824 298 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC188H7C350 AL008582.1-201ENST00000609612 442 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 NF1P10-201ENST00000613227 742 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
CCDC188H7C350 MIR6849-201ENST00000618543 69 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC188H7C350 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC188H7C350 CDY11P-201ENST00000447168 1651 ntBASIC6.22□□□□□ -1.41
CCDC188H7C350 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC188H7C350 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC188H7C350 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CCDC188H7C350 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC188H7C350 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC188H7C350 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC188H7C350 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC188H7C350 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
CCDC188H7C350 CASC19-246ENST00000641625 1606 ntBASIC6.21□□□□□ -1.41
CCDC188H7C350 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC188H7C350 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms