Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 MGAT2P1-201ENST00000449718 797 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 VN1R38P-201ENST00000450265 887 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AL353718.1-201ENST00000451028 517 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 PPIAP27-201ENST00000453800 265 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 VPS25P1-201ENST00000455691 508 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 NPM1P27-201ENST00000502784 830 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 LSM3P4-201ENST00000502948 309 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 MTND6P8-201ENST00000503471 522 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AC008628.1-201ENST00000508663 265 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 IGKV2-4-201ENST00000523070 340 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AP000662.1-201ENST00000530952 487 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AP004609.2-201ENST00000532177 190 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AC005000.1-201ENST00000536192 288 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AC079905.1-201ENST00000549280 475 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AC073333.2-201ENST00000603589 769 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AP001823.1-201ENST00000604056 1003 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AC097467.4-201ENST00000605504 141 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AL008723.3-201ENST00000608926 449 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 MIR7159-201ENST00000620587 66 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 AC068446.1-201ENST00000556425 1549 ntBASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TBC1D3FA6NER0 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 EIF3EP1-201ENST00000433978 1316 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AC009135.2-201ENST00000624136 1768 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 RNA5SP188-201ENST00000362916 129 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 RPL34P27-201ENST00000428810 349 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AC074367.1-201ENST00000438685 1125 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AL353662.1-201ENST00000439099 327 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 NPM1P52-201ENST00000518264 846 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AC073581.1-201ENST00000519036 575 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 OR7E10P-201ENST00000526420 991 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 OR4R2P-201ENST00000530815 597 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AC092451.2-201ENST00000538746 658 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 OR4H6P-202ENST00000603819 340 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AL096712.1-201ENST00000614561 159 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AC004801.6-201ENST00000616571 978 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AL133243.2-201ENST00000610331 1621 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AL354854.1-201ENST00000455940 1363 ntBASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TBC1D3FA6NER0 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms