Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AL355143.1-201ENST00000407101 841 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 RN7SKP281-201ENST00000410472 352 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 RPS3P2-201ENST00000421346 701 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 NPM1P26-201ENST00000426339 738 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 MED28P4-201ENST00000433137 572 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AC009963.4-201ENST00000448535 339 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 OR7E99P-201ENST00000505750 922 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 PRMT5P1-201ENST00000514351 598 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 RN7SKP157-201ENST00000516174 282 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 MIR4701-201ENST00000583094 63 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AC020765.1-201ENST00000604296 328 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 BNIP3P31-201ENST00000604515 566 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AC073046.2-201ENST00000604756 527 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AC018645.2-201ENST00000609151 472 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AL080312.2-201ENST00000613001 630 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AC016957.2-201ENST00000616998 848 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AC129778.1-202ENST00000623812 261 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AC120057.5-201ENST00000623840 154 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AC010872.1-201ENST00000624225 675 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AL591379.1-207ENST00000635982 261 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 MTND4P9-201ENST00000507819 1346 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 SNORA51.9-201ENST00000384295 124 ntBASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 AC007068.1-201ENST00000396690 844 ntBASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 AC112492.2-201ENST00000432774 1030 ntBASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 AC023194.2-201ENST00000465398 406 ntBASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 AC026254.2-201ENST00000475295 371 ntBASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 AC117395.1-201ENST00000487390 403 ntBASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 PCNAP1-201ENST00000505363 709 ntBASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 AC119751.4-201ENST00000507498 357 ntBASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 NPM1P21-201ENST00000513394 762 ntBASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 IGHV4-55-201ENST00000520889 368 ntBASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 AC079905.1-201ENST00000549280 475 ntBASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 FXNP1-201ENST00000555153 337 ntBASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 CKS1BP1-201ENST00000555221 240 ntBASIC6.13□□□□□ -1.43
CCDC187A0A096LP49 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms