Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC7.79□□□□□ -1.16
PCDHB11Q9Y5F2 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC7.79□□□□□ -1.16
PCDHB11Q9Y5F2 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHB11Q9Y5F2 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHB11Q9Y5F2 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHB11Q9Y5F2 AC003985.2-201ENST00000562268 1669 ntBASIC7.79□□□□□ -1.16
PCDHB11Q9Y5F2 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHB11Q9Y5F2 AC117382.2-201ENST00000564748 3151 ntBASIC7.79□□□□□ -1.16
PCDHB11Q9Y5F2 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC7.79□□□□□ -1.16
PCDHB11Q9Y5F2 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
PCDHB11Q9Y5F2 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 PARP1P1-201ENST00000413631 3026 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 HMGB1P5-201ENST00000255320 642 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 RNU6-692P-201ENST00000384496 107 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 MIR525-201ENST00000384978 85 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 RNA5SP297-201ENST00000391029 113 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AC007066.1-201ENST00000392902 381 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 LSM5-205ENST00000409952 687 ntTSL 4 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 ATP5HP2-201ENST00000433885 485 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 SEPT7P5-201ENST00000434048 306 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 HMGB1P45-201ENST00000435986 653 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AC244505.5-201ENST00000443639 207 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 PRMT8-203ENST00000452611 1204 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 RANP1-206ENST00000455094 651 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 RN7SL791P-201ENST00000467868 295 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AC009269.1-202ENST00000484381 469 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AF305872.1-201ENST00000485217 471 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 LEF1-AS1-206ENST00000512129 430 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 PTTG3P-201ENST00000521862 606 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 RN7SL657P-201ENST00000582431 293 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 DUXAP4-201ENST00000603046 613 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 RN7SL715P-201ENST00000606972 286 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AC069499.2-201ENST00000610665 382 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AL121890.2-201ENST00000617644 465 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AC009159.1-201ENST00000618386 642 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 MTCO1P6-201ENST00000481192 1384 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms