Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.06
NINLQ9Y2I6 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
NINLQ9Y2I6 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
NINLQ9Y2I6 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.4□□□□□ -1.06
NINLQ9Y2I6 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
NINLQ9Y2I6 AP001541.1-201ENST00000623322 1904 ntBASIC8.4□□□□□ -1.06
NINLQ9Y2I6 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
NINLQ9Y2I6 RNU1-19P-201ENST00000363306 165 ntBASIC8.4□□□□□ -1.06
NINLQ9Y2I6 FABP12P1-201ENST00000401911 322 ntBASIC8.4□□□□□ -1.06
NINLQ9Y2I6 OR2AT2P-201ENST00000413438 905 ntBASIC8.4□□□□□ -1.06
NINLQ9Y2I6 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC8.4□□□□□ -1.06
NINLQ9Y2I6 VN1R110P-201ENST00000438988 971 ntBASIC8.4□□□□□ -1.06
NINLQ9Y2I6 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC8.4□□□□□ -1.06
NINLQ9Y2I6 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC8.4□□□□□ -1.06
NINLQ9Y2I6 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC8.4□□□□□ -1.06
NINLQ9Y2I6 PFN1P6-201ENST00000476786 399 ntBASIC8.4□□□□□ -1.06
NINLQ9Y2I6 AC114728.1-201ENST00000488289 483 ntBASIC8.4□□□□□ -1.06
NINLQ9Y2I6 RPL17P2-201ENST00000491913 451 ntBASIC8.4□□□□□ -1.06
NINLQ9Y2I6 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC8.4□□□□□ -1.06
NINLQ9Y2I6 RNA5SP34-201ENST00000516887 130 ntBASIC8.4□□□□□ -1.06
NINLQ9Y2I6 AC087360.1-201ENST00000518788 616 ntBASIC8.4□□□□□ -1.06
NINLQ9Y2I6 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC8.4□□□□□ -1.06
NINLQ9Y2I6 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
NINLQ9Y2I6 AC005244.1-201ENST00000582566 339 ntBASIC8.4□□□□□ -1.06
NINLQ9Y2I6 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC8.4□□□□□ -1.06
NINLQ9Y2I6 AC012254.3-201ENST00000591183 2117 ntBASIC8.4□□□□□ -1.06
NINLQ9Y2I6 Z83820.1-201ENST00000456978 1499 ntBASIC8.4□□□□□ -1.06
NINLQ9Y2I6 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
NINLQ9Y2I6 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
NINLQ9Y2I6 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
NINLQ9Y2I6 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC8.4□□□□□ -1.07
NINLQ9Y2I6 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC8.4□□□□□ -1.07
NINLQ9Y2I6 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
NINLQ9Y2I6 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC8.4□□□□□ -1.07
NINLQ9Y2I6 MAPK10-261ENST00000641050 3109 ntBASIC8.4□□□□□ -1.07
NINLQ9Y2I6 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
NINLQ9Y2I6 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 RPL35AP3-201ENST00000414680 288 ntBASIC8.39□□□□□ -1.07
NINLQ9Y2I6 KIF4CP-201ENST00000422742 1279 ntBASIC8.39□□□□□ -1.07
NINLQ9Y2I6 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 RPL23AP60-201ENST00000450011 454 ntBASIC8.39□□□□□ -1.07
NINLQ9Y2I6 AC103563.5-201ENST00000455643 364 ntBASIC8.39□□□□□ -1.07
NINLQ9Y2I6 AC011476.1-201ENST00000466725 307 ntBASIC8.39□□□□□ -1.07
NINLQ9Y2I6 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 SETP21-201ENST00000514799 892 ntBASIC8.39□□□□□ -1.07
NINLQ9Y2I6 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 AC012557.1-201ENST00000607115 611 ntBASIC8.39□□□□□ -1.07
NINLQ9Y2I6 AC096708.4-201ENST00000620563 552 ntBASIC8.39□□□□□ -1.07
NINLQ9Y2I6 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 CR383656.5-201ENST00000547616 1340 ntBASIC8.39□□□□□ -1.07
NINLQ9Y2I6 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
NINLQ9Y2I6 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 AC096921.2-201ENST00000561507 1916 ntBASIC8.38□□□□□ -1.07
NINLQ9Y2I6 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 OR52B3P-201ENST00000314715 928 ntBASIC8.38□□□□□ -1.07
NINLQ9Y2I6 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 SNORA70H-201ENST00000383910 135 ntBASIC8.38□□□□□ -1.07
NINLQ9Y2I6 SNORA70J-201ENST00000384182 135 ntBASIC8.38□□□□□ -1.07
NINLQ9Y2I6 SPTLC1P2-201ENST00000407089 121 ntBASIC8.38□□□□□ -1.07
NINLQ9Y2I6 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 CDH12P4-201ENST00000517835 295 ntBASIC8.38□□□□□ -1.07
NINLQ9Y2I6 CDH12P3-201ENST00000517935 295 ntBASIC8.38□□□□□ -1.07
NINLQ9Y2I6 CDH12P1-201ENST00000518435 295 ntBASIC8.38□□□□□ -1.07
NINLQ9Y2I6 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
NINLQ9Y2I6 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms