Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 AC073488.6-201ENST00000632293 754 ntBASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 OLMALINC-203ENST00000641087 3779 ntBASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 AL136531.3-201ENST00000624378 3658 ntBASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 SNORA77.2-201ENST00000408571 112 ntBASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 AC094019.1-201ENST00000434678 472 ntBASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 AC097463.1-201ENST00000447288 481 ntBASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 AP000547.1-201ENST00000454360 617 ntBASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 RPL12P30-201ENST00000488389 499 ntBASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 RN7SL104P-201ENST00000498686 293 ntBASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 LSM3P4-201ENST00000502948 309 ntBASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 WBP1LP8-201ENST00000617401 327 ntBASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 AP001264.1-201ENST00000620602 703 ntBASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 AC073365.1-203ENST00000641055 1992 ntBASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSX2IPQ9Y2D8 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 AL353743.3-201ENST00000442109 1468 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 RNU6-819P-201ENST00000364116 107 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 SNORA70.9-201ENST00000384370 135 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 RNU6-883P-201ENST00000384597 107 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 RN7SKP281-201ENST00000410472 352 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 RPL17P35-201ENST00000432217 549 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 GXYLT1P1-201ENST00000446657 490 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 RPL12P31-201ENST00000478433 450 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 RPL17P2-201ENST00000491913 451 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 RBBP4P1-201ENST00000502424 1276 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 AC095052.1-201ENST00000509955 863 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 SNORA70.17-201ENST00000516449 133 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 AC090115.2-201ENST00000548060 883 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 TPRX1P1-201ENST00000557620 319 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 AC126365.2-201ENST00000580630 379 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 AP003789.1-201ENST00000617737 605 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 OR1N1-202ENST00000619659 939 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 FAM27E2-201ENST00000619668 403 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 AL354718.1-201ENST00000619764 589 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 AC006249.1-201ENST00000621223 471 ntBASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.85□□□□□ -1.31
SSX2IPQ9Y2D8 AL359694.2-201ENST00000567753 1615 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms