Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HPS5Q9UPZ3 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC9.2□□□□□ -0.94
HPS5Q9UPZ3 MAPK10-313ENST00000641405 2469 ntBASIC9.2□□□□□ -0.94
HPS5Q9UPZ3 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
HPS5Q9UPZ3 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HPS5Q9UPZ3 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HPS5Q9UPZ3 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 XRCC6P2-201ENST00000457831 1822 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 RNU6-254P-201ENST00000363377 107 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 RNY4P14-201ENST00000363656 96 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 H2AFZP3-201ENST00000394213 387 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AL356121.1-201ENST00000442911 156 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 TRIM60P16-201ENST00000444048 694 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AC017037.1-201ENST00000508460 471 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 RN7SKP2-201ENST00000517003 319 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AC024405.1-201ENST00000532521 1042 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AC005000.1-201ENST00000536192 288 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AL049830.4-201ENST00000555149 351 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AC138207.8-204ENST00000579588 527 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AC090415.1-201ENST00000581877 847 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 BNIP3P22-201ENST00000593399 556 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AL442067.1-201ENST00000613261 223 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AC023158.2-201ENST00000614876 543 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 AC012557.3-201ENST00000626439 255 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 TEX21P-201ENST00000447107 1476 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 MTCO1P9-201ENST00000505577 1534 ntBASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
HPS5Q9UPZ3 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 RNA5SP429-201ENST00000363688 109 ntBASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 MIR551B-201ENST00000384984 96 ntBASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 MT-RNR2-201ENST00000387347 1559 ntBASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 RNU6-932P-201ENST00000391108 106 ntBASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 AL035419.1-201ENST00000397037 564 ntBASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 LINC00993-201ENST00000420453 540 ntBASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 RPS4XP16-201ENST00000427198 791 ntBASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 AC008072.1-201ENST00000434254 824 ntBASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 NDUFS5P2-201ENST00000484004 306 ntBASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 AC105252.1-201ENST00000503089 286 ntBASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 IGKV3D-31-201ENST00000519131 281 ntBASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms