Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 MIR6862-1-201ENST00000613016 70 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 MIR6862-2-201ENST00000614755 70 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 MIR6729-201ENST00000618194 65 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 AC132825.8-201ENST00000640783 297 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 MTCO1P46-201ENST00000451639 1491 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 BIN2P1-201ENST00000504996 1530 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 MTCO1P28-201ENST00000574177 1528 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AC011815.2-201ENST00000618230 2021 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 RNA5SP510-201ENST00000364697 99 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 RN7SKP161-201ENST00000411110 305 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 CYP4F30P-202ENST00000420048 405 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AC023141.3-201ENST00000436698 278 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AC092967.1-201ENST00000449016 481 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 PPIAP20-201ENST00000449839 135 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 VPS25P1-201ENST00000455691 508 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AC104109.1-201ENST00000498563 436 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AC025458.1-201ENST00000506046 166 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 RNA5SP400-201ENST00000517155 111 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AL121579.2-201ENST00000555466 590 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AP001823.1-201ENST00000604056 1003 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AL137246.2-201ENST00000613439 662 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AL512652.1-201ENST00000619006 500 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 AC024884.1-201ENST00000620583 399 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 WBP11P1-201ENST00000562560 1931 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 OR4G1P-202ENST00000641173 1788 ntBASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.69□□□□□ -1.5
NPIPA1Q9UND3 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AC023490.2-201ENST00000359859 470 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 RNA5SP110-201ENST00000362638 115 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 RN7SKP121-201ENST00000410842 305 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AC116036.1-201ENST00000412199 367 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 RPS7P14-201ENST00000426405 583 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AC013410.1-201ENST00000436223 1232 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 HLA-DPA3-207ENST00000454398 229 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AC084754.1-201ENST00000463466 464 ntBASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.68□□□□□ -1.5
NPIPA1Q9UND3 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms