Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
RIMBP3Q9UFD9 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
RIMBP3Q9UFD9 AC004975.1-201ENST00000428733 208 ntBASIC9.21□□□□□ -0.93
RIMBP3Q9UFD9 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC9.21□□□□□ -0.93
RIMBP3Q9UFD9 PPM1AP1-201ENST00000502740 1135 ntBASIC9.21□□□□□ -0.93
RIMBP3Q9UFD9 HMGB1P23-201ENST00000518743 568 ntBASIC9.21□□□□□ -0.93
RIMBP3Q9UFD9 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC9.21□□□□□ -0.93
RIMBP3Q9UFD9 AC092490.3-201ENST00000545370 572 ntBASIC9.21□□□□□ -0.93
RIMBP3Q9UFD9 BLZF2P-201ENST00000553776 1130 ntBASIC9.21□□□□□ -0.93
RIMBP3Q9UFD9 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC9.21□□□□□ -0.93
RIMBP3Q9UFD9 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC9.21□□□□□ -0.93
RIMBP3Q9UFD9 MIR4270-201ENST00000581799 70 ntBASIC9.21□□□□□ -0.93
RIMBP3Q9UFD9 AC069307.1-201ENST00000602820 447 ntBASIC9.21□□□□□ -0.93
RIMBP3Q9UFD9 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC9.21□□□□□ -0.93
RIMBP3Q9UFD9 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
RIMBP3Q9UFD9 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
RIMBP3Q9UFD9 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
RIMBP3Q9UFD9 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
RIMBP3Q9UFD9 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
RIMBP3Q9UFD9 AP002991.2-201ENST00000623807 2801 ntBASIC9.21□□□□□ -0.94
RIMBP3Q9UFD9 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
RIMBP3Q9UFD9 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC9.21□□□□□ -0.94
RIMBP3Q9UFD9 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 COX6B1P1-201ENST00000415962 213 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 OR7H2P-201ENST00000513483 306 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 GLRXP2-201ENST00000555594 321 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 AC127381.1-201ENST00000555979 939 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 BNIP3P5-201ENST00000562290 498 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 GARSP1-201ENST00000570895 719 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 MIR3160-1-201ENST00000577972 85 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 FTO-223ENST00000640179 210 ntTSL 5 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 CASC19-260ENST00000641828 2001 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 SNORA67-201ENST00000384423 137 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 AL389915.1-201ENST00000422463 466 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 DSTNP5-201ENST00000427921 523 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 AC122718.1-201ENST00000439448 744 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 FAM133DP-201ENST00000464802 691 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 RN7SL41P-201ENST00000476144 297 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 RPL23AP72-201ENST00000492447 435 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 NPM1P27-201ENST00000502784 830 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 AC026688.1-201ENST00000520639 1168 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 AC005000.1-201ENST00000536192 288 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 AC011453.2-201ENST00000603737 729 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 EIF3FP1-201ENST00000613970 806 ntBASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
RIMBP3Q9UFD9 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 BIN2P1-201ENST00000504996 1530 ntBASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 RN7SKP149-201ENST00000363008 344 ntBASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 RNA5SP211-201ENST00000365516 117 ntBASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 SNORA48.7-201ENST00000391302 135 ntBASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 AC004690.1-201ENST00000418216 328 ntBASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 OR6D1P-201ENST00000436165 939 ntBASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 SDC4P-201ENST00000453285 601 ntBASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms