Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.23□□□□□ -1.25
CLIP2Q9UDT6 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CLIP2Q9UDT6 LINC00556-201ENST00000569603 412 ntBASIC7.23□□□□□ -1.25
CLIP2Q9UDT6 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.23□□□□□ -1.25
CLIP2Q9UDT6 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.23□□□□□ -1.25
CLIP2Q9UDT6 AC018690.1-201ENST00000608144 626 ntBASIC7.23□□□□□ -1.25
CLIP2Q9UDT6 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CLIP2Q9UDT6 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.23□□□□□ -1.25
CLIP2Q9UDT6 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CLIP2Q9UDT6 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CLIP2Q9UDT6 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CLIP2Q9UDT6 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.23□□□□□ -1.25
CLIP2Q9UDT6 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
CLIP2Q9UDT6 SAMMSON-210ENST00000641260 1308 ntBASIC7.23□□□□□ -1.25
CLIP2Q9UDT6 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CLIP2Q9UDT6 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 NCOA4P2-201ENST00000340589 1813 ntBASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 PSG10P-201ENST00000501199 1500 ntBASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 RBMY1HP-201ENST00000382759 1389 ntBASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 AC008627.1-201ENST00000517511 1704 ntBASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 RNU1-59P-201ENST00000364829 162 ntBASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 RPL35AP31-201ENST00000418340 337 ntBASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 BX679664.2-201ENST00000439282 283 ntBASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 AC025458.1-201ENST00000506046 166 ntBASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 PRMT5P1-201ENST00000514351 598 ntBASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 TRIM51DP-201ENST00000529746 596 ntBASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 NANOGNBP2-201ENST00000544753 553 ntBASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 AC008555.7-201ENST00000605008 583 ntBASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 U1.25-201ENST00000614085 162 ntBASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 U1.34-201ENST00000618578 162 ntBASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 U1.31-201ENST00000620022 160 ntBASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 AP001962.1-201ENST00000624114 559 ntBASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 AC024587.1-201ENST00000505925 2157 ntBASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CLIP2Q9UDT6 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CLIP2Q9UDT6 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.21□□□□□ -1.25
CLIP2Q9UDT6 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CLIP2Q9UDT6 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CLIP2Q9UDT6 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.21□□□□□ -1.25
CLIP2Q9UDT6 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
CLIP2Q9UDT6 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
CLIP2Q9UDT6 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CLIP2Q9UDT6 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 AL389925.1-201ENST00000432257 728 ntBASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 CST12P-201ENST00000457644 362 ntBASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 OR5H7P-201ENST00000514084 930 ntBASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 NPIPB1P-202ENST00000588786 828 ntBASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 AC022726.2-201ENST00000634673 547 ntBASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CLIP2Q9UDT6 AC092724.1-201ENST00000624623 3397 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms