Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6□□□□□ -1.45
CHD7Q9P2D1 AC011840.5-201ENST00000582125 771 ntBASIC6□□□□□ -1.45
CHD7Q9P2D1 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6□□□□□ -1.45
CHD7Q9P2D1 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6□□□□□ -1.45
CHD7Q9P2D1 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHD7Q9P2D1 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 RNA5SP305-201ENST00000362665 119 ntBASIC5.99□□□□□ -1.45
CHD7Q9P2D1 RNA5SP123-201ENST00000363244 119 ntBASIC5.99□□□□□ -1.45
CHD7Q9P2D1 MYL6P5-201ENST00000412707 459 ntBASIC5.99□□□□□ -1.45
CHD7Q9P2D1 AC023141.8-201ENST00000442554 208 ntBASIC5.99□□□□□ -1.45
CHD7Q9P2D1 RPL5P22-201ENST00000480199 884 ntBASIC5.99□□□□□ -1.45
CHD7Q9P2D1 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 CASC19-281ENST00000642118 1554 ntBASIC5.99□□□□□ -1.45
CHD7Q9P2D1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 RNA5SP335-201ENST00000363817 110 ntBASIC5.99□□□□□ -1.45
CHD7Q9P2D1 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 AC013442.1-201ENST00000397347 228 ntBASIC5.99□□□□□ -1.45
CHD7Q9P2D1 AL133388.1-201ENST00000404509 287 ntBASIC5.99□□□□□ -1.45
CHD7Q9P2D1 DSTNP5-201ENST00000427921 523 ntBASIC5.99□□□□□ -1.45
CHD7Q9P2D1 AC091153.1-201ENST00000466297 402 ntBASIC5.99□□□□□ -1.45
CHD7Q9P2D1 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 AC068831.8-201ENST00000620171 435 ntBASIC5.99□□□□□ -1.45
CHD7Q9P2D1 LCORL-207ENST00000635767 10430 ntTSL 5 BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.99□□□□□ -1.45
CHD7Q9P2D1 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 AC008072.1-201ENST00000434254 824 ntBASIC5.98□□□□□ -1.45
CHD7Q9P2D1 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 MIR4260-201ENST00000583107 67 ntBASIC5.98□□□□□ -1.45
CHD7Q9P2D1 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 AC112255.1-201ENST00000624070 2493 ntBASIC5.98□□□□□ -1.45
CHD7Q9P2D1 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 RNA5SP505-201ENST00000364748 108 ntBASIC5.98□□□□□ -1.45
CHD7Q9P2D1 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 AC093162.1-201ENST00000419682 124 ntBASIC5.98□□□□□ -1.45
CHD7Q9P2D1 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 RNF138P2-201ENST00000603490 592 ntBASIC5.98□□□□□ -1.45
CHD7Q9P2D1 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 AP000350.7-201ENST00000624923 8030 ntBASIC5.98□□□□□ -1.45
CHD7Q9P2D1 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHD7Q9P2D1 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 AC112187.1-201ENST00000455837 479 ntBASIC5.97□□□□□ -1.45
CHD7Q9P2D1 PRELID3BP5-201ENST00000508612 460 ntBASIC5.97□□□□□ -1.45
CHD7Q9P2D1 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 AC008745.1-201ENST00000604064 271 ntBASIC5.97□□□□□ -1.45
CHD7Q9P2D1 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 AC012618.3-205ENST00000637896 1496 ntBASIC5.97□□□□□ -1.45
CHD7Q9P2D1 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 RNF41-201ENST00000345093 5596 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 OR4A42P-201ENST00000531397 938 ntBASIC5.97□□□□□ -1.45
CHD7Q9P2D1 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.97□□□□□ -1.45
CHD7Q9P2D1 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms