Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC144521.1-201ENST00000607148 956 ntBASIC6.98□□□□□ -1.29
COL20A1Q9P218 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL20A1Q9P218 AP002345.2-201ENST00000609961 904 ntBASIC6.98□□□□□ -1.29
COL20A1Q9P218 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL20A1Q9P218 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL20A1Q9P218 AF287957.1-201ENST00000607368 1595 ntBASIC6.98□□□□□ -1.29
COL20A1Q9P218 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL20A1Q9P218 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL20A1Q9P218 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL20A1Q9P218 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL20A1Q9P218 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL20A1Q9P218 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL20A1Q9P218 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL20A1Q9P218 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL20A1Q9P218 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL20A1Q9P218 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL20A1Q9P218 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL20A1Q9P218 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 AL512504.1-201ENST00000415494 778 ntBASIC6.97□□□□□ -1.29
COL20A1Q9P218 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 AL451136.1-201ENST00000435399 325 ntBASIC6.97□□□□□ -1.29
COL20A1Q9P218 NDUFS5P5-201ENST00000437256 321 ntBASIC6.97□□□□□ -1.29
COL20A1Q9P218 AP000949.1-201ENST00000438328 629 ntBASIC6.97□□□□□ -1.29
COL20A1Q9P218 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 AC005077.1-201ENST00000449226 375 ntBASIC6.97□□□□□ -1.29
COL20A1Q9P218 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 AC117525.1-201ENST00000515228 503 ntBASIC6.97□□□□□ -1.29
COL20A1Q9P218 RNU6-943P-201ENST00000516960 98 ntBASIC6.97□□□□□ -1.29
COL20A1Q9P218 AC073581.1-201ENST00000519036 575 ntBASIC6.97□□□□□ -1.29
COL20A1Q9P218 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 IGKV3D-34-201ENST00000522638 302 ntBASIC6.97□□□□□ -1.29
COL20A1Q9P218 OR4A42P-201ENST00000531397 938 ntBASIC6.97□□□□□ -1.29
COL20A1Q9P218 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL20A1Q9P218 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 AL645933.2-201ENST00000606743 1207 ntBASIC6.97□□□□□ -1.29
COL20A1Q9P218 AL356490.1-201ENST00000623079 479 ntBASIC6.97□□□□□ -1.29
COL20A1Q9P218 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL20A1Q9P218 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL20A1Q9P218 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.97□□□□□ -1.29
COL20A1Q9P218 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL20A1Q9P218 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
COL20A1Q9P218 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.96□□□□□ -1.29
COL20A1Q9P218 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
COL20A1Q9P218 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
COL20A1Q9P218 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
COL20A1Q9P218 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
COL20A1Q9P218 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
COL20A1Q9P218 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
COL20A1Q9P218 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.96□□□□□ -1.29
COL20A1Q9P218 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
COL20A1Q9P218 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.96□□□□□ -1.29
COL20A1Q9P218 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL20A1Q9P218 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL20A1Q9P218 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
COL20A1Q9P218 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
COL20A1Q9P218 RNA5SP375-201ENST00000362975 119 ntBASIC6.96□□□□□ -1.3
COL20A1Q9P218 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL20A1Q9P218 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL20A1Q9P218 AL050305.1-201ENST00000399993 1230 ntBASIC6.96□□□□□ -1.3
COL20A1Q9P218 RPL35AP3-201ENST00000414680 288 ntBASIC6.96□□□□□ -1.3
COL20A1Q9P218 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.96□□□□□ -1.3
COL20A1Q9P218 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.96□□□□□ -1.3
COL20A1Q9P218 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.96□□□□□ -1.3
COL20A1Q9P218 FAR1P1-201ENST00000427163 934 ntBASIC6.96□□□□□ -1.3
COL20A1Q9P218 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.96□□□□□ -1.3
COL20A1Q9P218 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.96□□□□□ -1.3
COL20A1Q9P218 AC073072.2-201ENST00000447425 348 ntBASIC6.96□□□□□ -1.3
COL20A1Q9P218 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL20A1Q9P218 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms