Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 AC138915.4-201ENST00000565549 4147 ntBASIC5.59□□□□□ -1.51
CHD8Q9HCK8 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 RNA5SP388-201ENST00000362584 119 ntBASIC5.59□□□□□ -1.51
CHD8Q9HCK8 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 MIR1193-201ENST00000408109 78 ntBASIC5.59□□□□□ -1.51
CHD8Q9HCK8 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 AC005297.1-201ENST00000444765 862 ntBASIC5.59□□□□□ -1.51
CHD8Q9HCK8 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 AL133406.3-201ENST00000606817 541 ntBASIC5.59□□□□□ -1.51
CHD8Q9HCK8 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CHD8Q9HCK8 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CHD8Q9HCK8 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CHD8Q9HCK8 RNA5SP505-201ENST00000364748 108 ntBASIC5.59□□□□□ -1.52
CHD8Q9HCK8 OR2W4P-201ENST00000406496 926 ntBASIC5.59□□□□□ -1.52
CHD8Q9HCK8 AL096829.1-201ENST00000413677 457 ntBASIC5.59□□□□□ -1.52
CHD8Q9HCK8 SLC35E1P1-201ENST00000419313 864 ntBASIC5.59□□□□□ -1.52
CHD8Q9HCK8 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.59□□□□□ -1.52
CHD8Q9HCK8 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.59□□□□□ -1.52
CHD8Q9HCK8 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.59□□□□□ -1.52
CHD8Q9HCK8 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.59□□□□□ -1.52
CHD8Q9HCK8 AL035090.1-201ENST00000454835 332 ntBASIC5.59□□□□□ -1.52
CHD8Q9HCK8 SNORA59A-201ENST00000459326 152 ntBASIC5.59□□□□□ -1.52
CHD8Q9HCK8 RN7SKP83-201ENST00000516512 178 ntBASIC5.59□□□□□ -1.52
CHD8Q9HCK8 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.59□□□□□ -1.52
CHD8Q9HCK8 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC5.59□□□□□ -1.52
CHD8Q9HCK8 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.59□□□□□ -1.52
CHD8Q9HCK8 MIR3160-1-201ENST00000577972 85 ntBASIC5.59□□□□□ -1.52
CHD8Q9HCK8 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.59□□□□□ -1.52
CHD8Q9HCK8 AC008745.1-201ENST00000604064 271 ntBASIC5.59□□□□□ -1.52
CHD8Q9HCK8 AL161637.1-201ENST00000622380 412 ntBASIC5.59□□□□□ -1.52
CHD8Q9HCK8 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
CHD8Q9HCK8 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 AC006213.6-201ENST00000623722 4179 ntBASIC5.58□□□□□ -1.52
CHD8Q9HCK8 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 AC114786.1-201ENST00000512892 1415 ntBASIC5.58□□□□□ -1.52
CHD8Q9HCK8 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 AC108075.1-201ENST00000424692 529 ntBASIC5.58□□□□□ -1.52
CHD8Q9HCK8 AC104837.2-201ENST00000427236 424 ntBASIC5.58□□□□□ -1.52
CHD8Q9HCK8 CNOT7P1-201ENST00000429006 852 ntBASIC5.58□□□□□ -1.52
CHD8Q9HCK8 Z68868.1-201ENST00000429048 544 ntBASIC5.58□□□□□ -1.52
CHD8Q9HCK8 GAPDHP23-201ENST00000444823 993 ntBASIC5.58□□□□□ -1.52
CHD8Q9HCK8 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 AC053481.3-201ENST00000577881 843 ntBASIC5.58□□□□□ -1.52
CHD8Q9HCK8 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 AC008785.1-201ENST00000624475 456 ntBASIC5.58□□□□□ -1.52
CHD8Q9HCK8 AL353662.3-201ENST00000625131 237 ntBASIC5.58□□□□□ -1.52
CHD8Q9HCK8 AC119674.1-201ENST00000641611 1210 ntBASIC5.58□□□□□ -1.52
CHD8Q9HCK8 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 AC009948.3-201ENST00000603415 1798 ntBASIC5.58□□□□□ -1.52
CHD8Q9HCK8 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 KIF4CP-201ENST00000422742 1279 ntBASIC5.58□□□□□ -1.52
CHD8Q9HCK8 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.58□□□□□ -1.52
CHD8Q9HCK8 AC016712.1-201ENST00000431088 378 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms