Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 THAP12P9-201ENST00000503971 2360 ntBASIC8.57□□□□□ -1.04
SIN3AQ96ST3 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC8.56□□□□□ -1.04
SIN3AQ96ST3 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC8.56□□□□□ -1.04
SIN3AQ96ST3 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
SIN3AQ96ST3 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC8.56□□□□□ -1.04
SIN3AQ96ST3 AC093829.1-201ENST00000506662 1618 ntBASIC8.56□□□□□ -1.04
SIN3AQ96ST3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SIN3AQ96ST3 FIG4-202ENST00000368941 791 ntTSL 3 BASIC8.56□□□□□ -1.04
SIN3AQ96ST3 SNORA11.5-201ENST00000408163 128 ntBASIC8.56□□□□□ -1.04
SIN3AQ96ST3 HSD17B7P1-201ENST00000412419 1017 ntBASIC8.56□□□□□ -1.04
SIN3AQ96ST3 EIF5AP4-201ENST00000441206 465 ntBASIC8.56□□□□□ -1.04
SIN3AQ96ST3 AC004129.2-201ENST00000457229 287 ntBASIC8.56□□□□□ -1.04
SIN3AQ96ST3 PFN1P6-201ENST00000476786 399 ntBASIC8.56□□□□□ -1.04
SIN3AQ96ST3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC8.56□□□□□ -1.04
SIN3AQ96ST3 SCARNA18.1-201ENST00000516330 83 ntBASIC8.56□□□□□ -1.04
SIN3AQ96ST3 RN7SKP70-201ENST00000516655 271 ntBASIC8.56□□□□□ -1.04
SIN3AQ96ST3 AC060775.1-201ENST00000518241 520 ntBASIC8.56□□□□□ -1.04
SIN3AQ96ST3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC8.56□□□□□ -1.04
SIN3AQ96ST3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC8.56□□□□□ -1.04
SIN3AQ96ST3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC8.56□□□□□ -1.04
SIN3AQ96ST3 AP003789.1-201ENST00000617737 605 ntBASIC8.56□□□□□ -1.04
SIN3AQ96ST3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC8.56□□□□□ -1.04
SIN3AQ96ST3 5S_rRNA.28-201ENST00000638107 119 ntBASIC8.56□□□□□ -1.04
SIN3AQ96ST3 AC011933.2-201ENST00000578539 2790 ntBASIC8.56□□□□□ -1.04
SIN3AQ96ST3 AL139805.2-201ENST00000455305 2433 ntBASIC8.56□□□□□ -1.04
SIN3AQ96ST3 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.56□□□□□ -1.04
SIN3AQ96ST3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SIN3AQ96ST3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 AP003396.4-201ENST00000527574 265 ntBASIC8.55□□□□□ -1.04
SIN3AQ96ST3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 IMMTP1-201ENST00000435590 2219 ntBASIC8.55□□□□□ -1.04
SIN3AQ96ST3 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
SIN3AQ96ST3 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 AL731532.1-201ENST00000623972 4236 ntBASIC8.54□□□□□ -1.04
SIN3AQ96ST3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 RPL23AP17-201ENST00000401064 499 ntBASIC8.54□□□□□ -1.04
SIN3AQ96ST3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 B4GALNT2P1-201ENST00000508857 307 ntBASIC8.54□□□□□ -1.04
SIN3AQ96ST3 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 AP004609.2-201ENST00000532177 190 ntBASIC8.54□□□□□ -1.04
SIN3AQ96ST3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 AC145423.1-201ENST00000605712 336 ntBASIC8.54□□□□□ -1.04
SIN3AQ96ST3 AC022919.1-201ENST00000624979 626 ntBASIC8.54□□□□□ -1.04
SIN3AQ96ST3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
SIN3AQ96ST3 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC8.53□□□□□ -1.04
SIN3AQ96ST3 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
SIN3AQ96ST3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
SIN3AQ96ST3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC8.53□□□□□ -1.04
SIN3AQ96ST3 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC8.53□□□□□ -1.04
SIN3AQ96ST3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
SIN3AQ96ST3 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
SIN3AQ96ST3 MFSD8-239ENST00000641590 2479 ntBASIC8.53□□□□□ -1.04
SIN3AQ96ST3 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC8.53□□□□□ -1.04
SIN3AQ96ST3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms