Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
IFT140Q96RY7 AC096921.2-201ENST00000561507 1916 ntBASIC9.68□□□□□ -0.86
IFT140Q96RY7 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
IFT140Q96RY7 RNVU1-6-201ENST00000364688 164 ntBASIC9.68□□□□□ -0.86
IFT140Q96RY7 AC016397.1-201ENST00000412463 242 ntBASIC9.68□□□□□ -0.86
IFT140Q96RY7 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC9.68□□□□□ -0.86
IFT140Q96RY7 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC9.68□□□□□ -0.86
IFT140Q96RY7 AL663074.2-201ENST00000440621 479 ntBASIC9.68□□□□□ -0.86
IFT140Q96RY7 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC9.68□□□□□ -0.86
IFT140Q96RY7 AL389915.2-201ENST00000454576 441 ntBASIC9.68□□□□□ -0.86
IFT140Q96RY7 AC083982.1-201ENST00000485679 344 ntBASIC9.68□□□□□ -0.86
IFT140Q96RY7 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC9.68□□□□□ -0.86
IFT140Q96RY7 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC9.68□□□□□ -0.86
IFT140Q96RY7 AC018552.1-201ENST00000562099 811 ntBASIC9.68□□□□□ -0.86
IFT140Q96RY7 AC006116.3-201ENST00000592968 361 ntBASIC9.68□□□□□ -0.86
IFT140Q96RY7 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC9.68□□□□□ -0.86
IFT140Q96RY7 AP002799.1-201ENST00000623552 423 ntBASIC9.68□□□□□ -0.86
IFT140Q96RY7 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC9.68□□□□□ -0.86
IFT140Q96RY7 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
IFT140Q96RY7 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
IFT140Q96RY7 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
IFT140Q96RY7 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
IFT140Q96RY7 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC9.68□□□□□ -0.86
IFT140Q96RY7 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
IFT140Q96RY7 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
IFT140Q96RY7 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
IFT140Q96RY7 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
IFT140Q96RY7 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC9.68□□□□□ -0.86
IFT140Q96RY7 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
IFT140Q96RY7 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
IFT140Q96RY7 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
IFT140Q96RY7 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC9.67□□□□□ -0.86
IFT140Q96RY7 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
IFT140Q96RY7 CAV1-204ENST00000393470 598 ntTSL 4 BASIC9.67□□□□□ -0.86
IFT140Q96RY7 CYB5AP4-201ENST00000396692 399 ntBASIC9.67□□□□□ -0.86
IFT140Q96RY7 AC006466.1-201ENST00000438721 289 ntBASIC9.67□□□□□ -0.86
IFT140Q96RY7 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
IFT140Q96RY7 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC9.67□□□□□ -0.86
IFT140Q96RY7 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC9.67□□□□□ -0.86
IFT140Q96RY7 AC021678.3-201ENST00000517893 476 ntBASIC9.67□□□□□ -0.86
IFT140Q96RY7 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC9.67□□□□□ -0.86
IFT140Q96RY7 AL021368.3-201ENST00000607119 578 ntBASIC9.67□□□□□ -0.86
IFT140Q96RY7 AC000068.2-201ENST00000608816 460 ntBASIC9.67□□□□□ -0.86
IFT140Q96RY7 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC9.67□□□□□ -0.86
IFT140Q96RY7 ATM-215ENST00000530958 5718 ntTSL 2 BASIC9.67□□□□□ -0.86
IFT140Q96RY7 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
IFT140Q96RY7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
IFT140Q96RY7 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
IFT140Q96RY7 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
IFT140Q96RY7 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC9.67□□□□□ -0.86
IFT140Q96RY7 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
IFT140Q96RY7 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC9.67□□□□□ -0.86
IFT140Q96RY7 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
IFT140Q96RY7 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
IFT140Q96RY7 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
IFT140Q96RY7 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
IFT140Q96RY7 ADIG-201ENST00000373348 430 ntTSL 2 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 AL133325.1-201ENST00000421090 382 ntBASIC9.66□□□□□ -0.86
IFT140Q96RY7 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 AL022394.1-201ENST00000606979 292 ntBASIC9.66□□□□□ -0.86
IFT140Q96RY7 AC009163.6-201ENST00000612367 342 ntBASIC9.66□□□□□ -0.86
IFT140Q96RY7 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
IFT140Q96RY7 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
IFT140Q96RY7 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
IFT140Q96RY7 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
IFT140Q96RY7 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
IFT140Q96RY7 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
IFT140Q96RY7 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
IFT140Q96RY7 MRRF-207ENST00000373729 870 ntTSL 3 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 AP000547.1-201ENST00000454360 617 ntBASIC9.66□□□□□ -0.86
IFT140Q96RY7 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 AC006463.2-201ENST00000473326 348 ntBASIC9.66□□□□□ -0.86
IFT140Q96RY7 RN7SL570P-201ENST00000484405 292 ntBASIC9.66□□□□□ -0.86
IFT140Q96RY7 AC109462.1-201ENST00000491087 368 ntBASIC9.66□□□□□ -0.86
IFT140Q96RY7 IGHV1-14-201ENST00000523391 241 ntBASIC9.66□□□□□ -0.86
IFT140Q96RY7 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 MIR4480-201ENST00000582492 71 ntBASIC9.66□□□□□ -0.86
IFT140Q96RY7 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
IFT140Q96RY7 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
IFT140Q96RY7 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC9.65□□□□□ -0.86
IFT140Q96RY7 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
IFT140Q96RY7 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
IFT140Q96RY7 AP002370.1-201ENST00000528055 1602 ntBASIC9.65□□□□□ -0.86
IFT140Q96RY7 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
IFT140Q96RY7 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
IFT140Q96RY7 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC9.65□□□□□ -0.86
IFT140Q96RY7 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
IFT140Q96RY7 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms