Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.98□□□□□ -1.45
SNX18Q96RF0 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.98□□□□□ -1.45
SNX18Q96RF0 AC011921.2-201ENST00000589465 152 ntBASIC5.98□□□□□ -1.45
SNX18Q96RF0 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.98□□□□□ -1.45
SNX18Q96RF0 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SNX18Q96RF0 BNIP3P38-201ENST00000601117 544 ntBASIC5.98□□□□□ -1.45
SNX18Q96RF0 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.98□□□□□ -1.45
SNX18Q96RF0 HMGB1P51-201ENST00000605166 638 ntBASIC5.98□□□□□ -1.45
SNX18Q96RF0 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.98□□□□□ -1.45
SNX18Q96RF0 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX18Q96RF0 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
SNX18Q96RF0 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SNX18Q96RF0 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX18Q96RF0 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX18Q96RF0 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SNX18Q96RF0 AL929601.4-201ENST00000613011 1341 ntBASIC5.98□□□□□ -1.45
SNX18Q96RF0 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX18Q96RF0 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX18Q96RF0 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX18Q96RF0 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX18Q96RF0 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC087516.1-201ENST00000561236 2428 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX18Q96RF0 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC110373.1-201ENST00000505994 3505 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC010624.4-201ENST00000597606 1351 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX18Q96RF0 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX18Q96RF0 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 RNA5SP350-201ENST00000363298 111 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 RNU1-46P-201ENST00000384425 164 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX18Q96RF0 AL034417.1-201ENST00000399343 800 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 RPLP1P10-201ENST00000413972 339 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 RPS7P12-201ENST00000422385 582 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 MTCO1P45-201ENST00000431457 267 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 MTND2P21-201ENST00000436242 1042 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC013403.1-201ENST00000436954 263 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 XKRY2-201ENST00000442362 1093 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 AL356121.1-201ENST00000442911 156 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 RPL7AP71-201ENST00000451120 739 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 CEACAMP11-201ENST00000455211 583 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC236972.4-201ENST00000458091 963 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 RN7SL790P-201ENST00000474043 298 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 RPS3AP6-201ENST00000484430 795 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 EIF4E2P2-201ENST00000492033 736 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 RNU6-334P-201ENST00000517072 102 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 CARSP2-201ENST00000520688 277 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 OR5D2P-201ENST00000524390 911 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 OR52K3P-201ENST00000531655 943 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX18Q96RF0 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 MIR4428-201ENST00000584884 73 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC008507.2-201ENST00000588402 1176 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC091057.3-201ENST00000602684 733 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 AL583832.1-201ENST00000603227 784 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC140725.3-201ENST00000616193 880 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 HTR1DP1-201ENST00000616500 888 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 AP000484.1-201ENST00000620067 1252 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC095038.2-201ENST00000621464 1070 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 AL356863.1-201ENST00000623378 1080 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX18Q96RF0 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX18Q96RF0 AC024651.2-201ENST00000562480 2098 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX18Q96RF0 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.97□□□□□ -1.45
SNX18Q96RF0 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX18Q96RF0 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SNX18Q96RF0 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SNX18Q96RF0 AC010401.2-201ENST00000575137 4934 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms