Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AC092070.2-203ENST00000598377 3644 ntBASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AC019072.1-201ENST00000604535 1551 ntBASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AC092451.3-201ENST00000625067 1343 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AL161756.3-201ENST00000641216 2071 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AC087516.1-201ENST00000561236 2428 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AC004076.2-201ENST00000620532 3323 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 SLC2A3P2-201ENST00000331747 1480 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 RNU1-49P-201ENST00000363468 159 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AC245096.1-201ENST00000413104 546 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AL672212.1-201ENST00000422246 400 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 PRUNEP1-201ENST00000425846 705 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 CENPN-204ENST00000428963 971 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AL353803.3-201ENST00000444641 335 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AC073072.2-201ENST00000447425 348 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 RSU1P1-201ENST00000453416 441 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 RN7SL552P-201ENST00000462094 276 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 RN7SL70P-201ENST00000478322 302 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 GLUD1P3-202ENST00000508551 200 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 RN7SKP288-201ENST00000516227 268 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AC022616.2-201ENST00000523185 300 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 RPL41P2-201ENST00000544920 409 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AC007346.2-201ENST00000564816 892 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 ZNF322P1-201ENST00000568013 1209 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 RPL7AP69-201ENST00000595306 806 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AC006115.2-201ENST00000596823 202 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AC141002.1-201ENST00000607025 279 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AL451049.1-201ENST00000608672 497 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 RN7SL261P-201ENST00000613441 282 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 AL049869.1-201ENST00000556933 1402 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 CDC27P2-201ENST00000425026 1922 ntBASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71LQ8N9Z2 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 CASC19-260ENST00000641828 2001 ntBASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 MRRFP1-201ENST00000435941 1675 ntBASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 AC138907.8-201ENST00000623981 2256 ntBASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 AC114774.1-201ENST00000507410 1770 ntBASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 RN7SKP121-201ENST00000410842 305 ntBASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 AL158827.1-201ENST00000416300 391 ntBASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 CDC42P6-201ENST00000421246 576 ntBASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 AC113412.1-201ENST00000425840 504 ntBASIC5.02□□□□□ -1.61
CCDC71LQ8N9Z2 BX276092.6-201ENST00000430476 250 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms