Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 AC011497.2-201ENST00000600255 639 ntBASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 AL078623.1-201ENST00000602702 907 ntBASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 SMIM12P1-201ENST00000603004 274 ntBASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 AC093635.1-201ENST00000609028 555 ntBASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 AC253576.2-201ENST00000618815 580 ntBASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 AC025262.3-201ENST00000623666 360 ntBASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 AC005702.3-201ENST00000585345 1447 ntBASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC33Q8N5R6 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.71□□□□□ -1.33
CCDC33Q8N5R6 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
CCDC33Q8N5R6 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC33Q8N5R6 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.71□□□□□ -1.33
CCDC33Q8N5R6 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC33Q8N5R6 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 GCNT1P4-201ENST00000404096 329 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 AC002127.1-201ENST00000421305 225 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 AC099782.1-201ENST00000425889 474 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 AC007679.3-201ENST00000434035 414 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 ARL5AP3-201ENST00000439327 386 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 GTF2IP14-201ENST00000441415 586 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 MTND2P25-201ENST00000449028 610 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 NDUFA5P5-201ENST00000468361 342 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 AC105918.1-201ENST00000474399 838 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 RPL19P11-201ENST00000495944 589 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 RPL3P13-201ENST00000550415 216 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 AC005726.4-201ENST00000582858 458 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 AC091193.1-201ENST00000604640 448 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 OR51C1P-201ENST00000608504 942 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 AP001962.1-201ENST00000624114 559 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 AC021766.1-201ENST00000624404 741 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 Z83820.1-201ENST00000456978 1499 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 AL359976.1-201ENST00000418655 3528 ntBASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC33Q8N5R6 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.7□□□□□ -1.34
CCDC33Q8N5R6 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
CCDC33Q8N5R6 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC33Q8N5R6 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC33Q8N5R6 MAPK10-287ENST00000641217 3037 ntBASIC6.7□□□□□ -1.34
CCDC33Q8N5R6 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC33Q8N5R6 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC33Q8N5R6 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CCDC33Q8N5R6 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC33Q8N5R6 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms