Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 GEMIN2P2-201ENST00000418195 715 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 CLIC4P3-201ENST00000422221 752 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC093107.1-201ENST00000422772 609 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 PPIL1P1-201ENST00000423936 499 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 HMGB3P6-201ENST00000444896 598 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AURKAPS1-201ENST00000451805 1212 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC066616.1-201ENST00000486795 413 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 MTND2P33-201ENST00000506452 1031 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 RPL10P18-201ENST00000519384 309 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 C1GALT1P3-201ENST00000522049 819 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 ST13P6-201ENST00000522430 1102 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AP003392.2-201ENST00000527269 208 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 MELK-208ENST00000536987 2125 ntTSL 2 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC011611.6-201ENST00000547483 255 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC087465.1-201ENST00000560574 245 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC079171.1-201ENST00000568788 914 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC022662.1-201ENST00000580252 331 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC009955.2-201ENST00000597288 542 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC091805.2-201ENST00000603848 235 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC108451.2-201ENST00000603875 538 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 RPS28P1-201ENST00000604589 187 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 PART1_1.1-201ENST00000611761 217 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 BX005040.2-201ENST00000620504 370 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AL356321.1-201ENST00000621360 228 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 uc_338.21-201ENST00000622458 147 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC087893.2-201ENST00000623272 255 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 USP3-201ENST00000268049 5311 ntTSL 5 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
ATG4DQ86TL0 AC006210.2-201ENST00000367074 1545 ntBASIC6.66□□□□□ -1.34
ATG4DQ86TL0 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 THAP12P8-201ENST00000447914 2115 ntBASIC6.65□□□□□ -1.34
ATG4DQ86TL0 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.65□□□□□ -1.34
ATG4DQ86TL0 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 AC087565.3-202ENST00000642085 1603 ntBASIC6.65□□□□□ -1.34
ATG4DQ86TL0 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 RNU6-157P-201ENST00000383957 107 ntBASIC6.65□□□□□ -1.34
ATG4DQ86TL0 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 RN7SKP33-201ENST00000410942 340 ntBASIC6.65□□□□□ -1.34
ATG4DQ86TL0 AL355862.1-201ENST00000412705 353 ntBASIC6.65□□□□□ -1.34
ATG4DQ86TL0 AC007899.1-201ENST00000412776 775 ntBASIC6.65□□□□□ -1.34
ATG4DQ86TL0 RPL12P10-201ENST00000413498 498 ntBASIC6.65□□□□□ -1.34
ATG4DQ86TL0 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 IPPKP1-201ENST00000422501 768 ntBASIC6.65□□□□□ -1.34
ATG4DQ86TL0 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.65□□□□□ -1.34
ATG4DQ86TL0 OR5P4P-201ENST00000424698 917 ntBASIC6.65□□□□□ -1.34
ATG4DQ86TL0 FDPSP1-201ENST00000424976 1071 ntBASIC6.65□□□□□ -1.34
ATG4DQ86TL0 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms