Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC104687.2-201ENST00000604442 342 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 GOLGA8CP-201ENST00000446144 5237 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 AL359955.1-201ENST00000455242 3275 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 NIPAL3-201ENST00000003912 5481 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 AC130304.1-201ENST00000622942 2385 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 RNA5SP505-201ENST00000364748 108 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 AL035419.1-201ENST00000397037 564 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 AC109462.1-201ENST00000491087 368 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 AL139099.4-201ENST00000614802 114 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 AL445528.2-201ENST00000620582 470 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 EPS15P1-202ENST00000459691 2071 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 AC010733.2-201ENST00000589496 5702 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 AC092821.3-202ENST00000641304 2767 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 FP325330.3-201ENST00000623760 9537 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
VPS13CQ709C8 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VPS13CQ709C8 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
VPS13CQ709C8 UBE2V1P14-201ENST00000415815 558 ntBASIC4.65□□□□□ -1.66
VPS13CQ709C8 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VPS13CQ709C8 AC024940.3-201ENST00000538551 316 ntBASIC4.65□□□□□ -1.66
VPS13CQ709C8 AC008033.2-201ENST00000542626 177 ntBASIC4.65□□□□□ -1.66
VPS13CQ709C8 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC4.65□□□□□ -1.66
VPS13CQ709C8 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.65□□□□□ -1.66
VPS13CQ709C8 AC011447.4-201ENST00000587562 111 ntBASIC4.65□□□□□ -1.66
VPS13CQ709C8 FAT4-201ENST00000335110 9669 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VPS13CQ709C8 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VPS13CQ709C8 ICK-202ENST00000356971 6227 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
VPS13CQ709C8 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
VPS13CQ709C8 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
VPS13CQ709C8 OR4D9-203ENST00000641962 6123 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
VPS13CQ709C8 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
VPS13CQ709C8 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VPS13CQ709C8 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VPS13CQ709C8 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.65□□□□□ -1.66
VPS13CQ709C8 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.65□□□□□ -1.66
VPS13CQ709C8 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VPS13CQ709C8 RPS27AP7-201ENST00000422792 455 ntBASIC4.65□□□□□ -1.66
VPS13CQ709C8 AC012519.1-201ENST00000424588 610 ntBASIC4.65□□□□□ -1.66
VPS13CQ709C8 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VPS13CQ709C8 AC112187.1-201ENST00000455837 479 ntBASIC4.65□□□□□ -1.66
VPS13CQ709C8 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.65□□□□□ -1.66
VPS13CQ709C8 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.65□□□□□ -1.66
VPS13CQ709C8 RNU6-941P-201ENST00000516346 108 ntBASIC4.65□□□□□ -1.66
VPS13CQ709C8 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.65□□□□□ -1.66
VPS13CQ709C8 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS13CQ709C8 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS13CQ709C8 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS13CQ709C8 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS13CQ709C8 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS13CQ709C8 DLG1-201ENST00000346964 5034 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS13CQ709C8 PWAR1-201ENST00000624188 2414 ntBASIC4.65□□□□□ -1.67
VPS13CQ709C8 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS13CQ709C8 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC4.65□□□□□ -1.67
VPS13CQ709C8 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS13CQ709C8 FAM234B-201ENST00000197268 4808 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS13CQ709C8 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
VPS13CQ709C8 AC068138.1-201ENST00000412635 217 ntBASIC4.65□□□□□ -1.67
VPS13CQ709C8 NIFKP3-201ENST00000417799 865 ntBASIC4.65□□□□□ -1.67
VPS13CQ709C8 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS13CQ709C8 FRG2FP-204ENST00000453982 852 ntBASIC4.65□□□□□ -1.67
VPS13CQ709C8 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS13CQ709C8 AC068522.1-201ENST00000482895 345 ntBASIC4.65□□□□□ -1.67
VPS13CQ709C8 RNA5SP373-201ENST00000517271 95 ntBASIC4.65□□□□□ -1.67
VPS13CQ709C8 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS13CQ709C8 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS13CQ709C8 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS13CQ709C8 AL353662.3-201ENST00000625131 237 ntBASIC4.65□□□□□ -1.67
VPS13CQ709C8 AC104964.2-201ENST00000562242 4641 ntBASIC4.65□□□□□ -1.67
VPS13CQ709C8 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
VPS13CQ709C8 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VPS13CQ709C8 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VPS13CQ709C8 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms