Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.61□□□□□ -1.51
C11orf88Q6PI97 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.61□□□□□ -1.51
C11orf88Q6PI97 RN7SL126P-201ENST00000616400 299 ntBASIC5.61□□□□□ -1.51
C11orf88Q6PI97 AL356274.1-201ENST00000617064 410 ntBASIC5.61□□□□□ -1.51
C11orf88Q6PI97 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.61□□□□□ -1.51
C11orf88Q6PI97 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.61□□□□□ -1.51
C11orf88Q6PI97 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
C11orf88Q6PI97 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.61□□□□□ -1.51
C11orf88Q6PI97 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.61□□□□□ -1.51
C11orf88Q6PI97 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.61□□□□□ -1.51
C11orf88Q6PI97 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.61□□□□□ -1.51
C11orf88Q6PI97 AC027228.2-201ENST00000567141 2154 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 AC093775.1-201ENST00000624154 1868 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 AC123769.1-201ENST00000530992 3192 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 RNU4-7P-201ENST00000364758 141 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 RNU1-59P-201ENST00000364829 162 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 LDHAP5-201ENST00000394996 622 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 TMA16P2-201ENST00000413187 601 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 HMGA1P8-201ENST00000414130 321 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 RNF19BPX-201ENST00000426224 625 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 RPL12P18-201ENST00000437175 325 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 TXNP2-201ENST00000443918 295 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 PPIAP32-201ENST00000449940 472 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 RN7SL350P-201ENST00000492591 299 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 AC008868.1-201ENST00000509786 737 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 AC067904.2-201ENST00000517322 1283 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 AC087888.1-201ENST00000550884 1254 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 HNRNPCP1-201ENST00000556181 766 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 AC004908.1-201ENST00000606572 541 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 U1.25-201ENST00000614085 162 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 U1.31-201ENST00000620022 160 ntBASIC5.6□□□□□ -1.51
C11orf88Q6PI97 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
C11orf88Q6PI97 BCORP1-203ENST00000513194 5093 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 CASC19-228ENST00000641414 1684 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 RNU6-670P-201ENST00000364312 104 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AL034403.1-201ENST00000399414 885 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 RN7SKP148-201ENST00000410179 275 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AC097721.1-201ENST00000427150 1253 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.59□□□□□ -1.51
C11orf88Q6PI97 CLNS1AP1-201ENST00000435954 682 ntBASIC5.59□□□□□ -1.51
C11orf88Q6PI97 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms