Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 AC090589.1-201ENST00000473109 362 ntBASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 RN7SL214P-201ENST00000487317 265 ntBASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 RN7SL193P-201ENST00000491708 276 ntBASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 AC114781.3-201ENST00000512083 142 ntBASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 SNORA70.17-201ENST00000516449 133 ntBASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 Y_RNA.710-201ENST00000516975 110 ntBASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 AC090236.2-201ENST00000587933 1101 ntBASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 NPIPB1P-202ENST00000588786 828 ntBASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 AC096586.2-201ENST00000610260 441 ntBASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 MIR6809-201ENST00000612189 116 ntBASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 AL163152.1-201ENST00000642001 374 ntBASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 MTCO1P11-201ENST00000429111 1528 ntBASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM71Q2Q1W2 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AC105114.1-201ENST00000624795 1862 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 OR52B3P-201ENST00000314715 928 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 RNU1-150P-201ENST00000362491 162 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 U3.43-201ENST00000410734 213 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AC245096.1-201ENST00000413104 546 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 Z68694.1-201ENST00000413929 841 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 NME1P1-201ENST00000420914 382 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 MTATP6P11-201ENST00000428071 670 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 RPL12P16-201ENST00000431098 498 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 NDUFS5P5-201ENST00000437256 321 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 ZNF736P11Y-201ENST00000442535 1213 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 ZNF736P12Y-201ENST00000443152 1243 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 ZNF736P4Y-201ENST00000454995 1243 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 SEPT7P6-201ENST00000469999 1143 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AC092824.1-201ENST00000483524 576 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 RN7SKP5-201ENST00000517045 272 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AC021269.1-201ENST00000526860 705 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AC027544.3-201ENST00000535082 757 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AC005014.3-201ENST00000605985 190 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AL136228.1-201ENST00000622221 319 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 BX284613.1-201ENST00000452221 1641 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 MAPK10-287ENST00000641217 3037 ntBASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM71Q2Q1W2 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM71Q2Q1W2 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM71Q2Q1W2 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms