Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RNA5SP350-201ENST00000363298 111 ntBASIC5.78□□□□□ -1.48
LTBQ06643 RN7SKP69-201ENST00000365390 305 ntBASIC5.78□□□□□ -1.48
LTBQ06643 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
LTBQ06643 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.78□□□□□ -1.48
LTBQ06643 DHFRP5-201ENST00000406944 564 ntBASIC5.78□□□□□ -1.48
LTBQ06643 AL512422.1-201ENST00000407033 553 ntBASIC5.78□□□□□ -1.48
LTBQ06643 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.78□□□□□ -1.48
LTBQ06643 RN7SKP129-201ENST00000410288 299 ntBASIC5.78□□□□□ -1.48
LTBQ06643 RNA5SP251-201ENST00000410614 137 ntBASIC5.78□□□□□ -1.48
LTBQ06643 IPPKP1-201ENST00000422501 768 ntBASIC5.78□□□□□ -1.48
LTBQ06643 RPL31P11-201ENST00000426558 1558 ntBASIC5.78□□□□□ -1.48
LTBQ06643 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.78□□□□□ -1.48
LTBQ06643 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
LTBQ06643 GAPDHP59-201ENST00000435908 267 ntBASIC5.78□□□□□ -1.48
LTBQ06643 MTND4P15-201ENST00000437913 1033 ntBASIC5.78□□□□□ -1.48
LTBQ06643 AC092967.1-201ENST00000449016 481 ntBASIC5.78□□□□□ -1.48
LTBQ06643 VN1R38P-201ENST00000450265 887 ntBASIC5.78□□□□□ -1.48
LTBQ06643 SNX18P26-201ENST00000458433 740 ntBASIC5.78□□□□□ -1.48
LTBQ06643 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.78□□□□□ -1.48
LTBQ06643 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.78□□□□□ -1.48
LTBQ06643 AC124945.1-201ENST00000485133 188 ntBASIC5.78□□□□□ -1.48
LTBQ06643 RPS4XP14-201ENST00000493072 781 ntBASIC5.78□□□□□ -1.48
LTBQ06643 AGGF1P3-201ENST00000493675 1213 ntBASIC5.78□□□□□ -1.48
LTBQ06643 HMGN1P16-201ENST00000508308 283 ntBASIC5.78□□□□□ -1.48
LTBQ06643 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.78□□□□□ -1.48
LTBQ06643 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.78□□□□□ -1.48
LTBQ06643 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.78□□□□□ -1.48
LTBQ06643 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.78□□□□□ -1.48
LTBQ06643 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.78□□□□□ -1.48
LTBQ06643 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.78□□□□□ -1.48
LTBQ06643 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
LTBQ06643 AP005639.1-201ENST00000526939 192 ntBASIC5.78□□□□□ -1.48
LTBQ06643 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
LTBQ06643 AC124891.1-201ENST00000536322 519 ntBASIC5.78□□□□□ -1.48
LTBQ06643 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LTBQ06643 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.78□□□□□ -1.48
LTBQ06643 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.78□□□□□ -1.48
LTBQ06643 TPRX1P1-201ENST00000557620 319 ntBASIC5.78□□□□□ -1.48
LTBQ06643 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.78□□□□□ -1.48
LTBQ06643 AC023968.1-201ENST00000560719 475 ntBASIC5.78□□□□□ -1.48
LTBQ06643 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.78□□□□□ -1.48
LTBQ06643 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.78□□□□□ -1.48
LTBQ06643 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.78□□□□□ -1.48
LTBQ06643 AL008723.3-201ENST00000608926 449 ntBASIC5.78□□□□□ -1.48
LTBQ06643 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.78□□□□□ -1.48
LTBQ06643 SNX18P12-201ENST00000624821 759 ntBASIC5.78□□□□□ -1.48
LTBQ06643 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.78□□□□□ -1.48
LTBQ06643 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
LTBQ06643 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LTBQ06643 MAPK10-287ENST00000641217 3037 ntBASIC5.78□□□□□ -1.48
LTBQ06643 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LTBQ06643 AC068769.1-201ENST00000474767 2426 ntBASIC5.78□□□□□ -1.48
LTBQ06643 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.78□□□□□ -1.48
LTBQ06643 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LTBQ06643 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
LTBQ06643 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.78□□□□□ -1.48
LTBQ06643 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
LTBQ06643 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
LTBQ06643 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LTBQ06643 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LTBQ06643 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
LTBQ06643 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.77□□□□□ -1.49
LTBQ06643 LINC01616-201ENST00000561816 2280 ntBASIC5.77□□□□□ -1.49
LTBQ06643 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LTBQ06643 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.77□□□□□ -1.49
LTBQ06643 LINC01613-201ENST00000561476 2780 ntBASIC5.77□□□□□ -1.49
LTBQ06643 MIPEPP2-201ENST00000422560 1819 ntBASIC5.77□□□□□ -1.49
LTBQ06643 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
LTBQ06643 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
LTBQ06643 ZNF658B-201ENST00000602828 3408 ntBASIC5.77□□□□□ -1.49
LTBQ06643 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
LTBQ06643 RNU4-23P-201ENST00000362839 140 ntBASIC5.77□□□□□ -1.49
LTBQ06643 RNU1-84P-201ENST00000365447 164 ntBASIC5.77□□□□□ -1.49
LTBQ06643 SNORA77.2-201ENST00000408571 112 ntBASIC5.77□□□□□ -1.49
LTBQ06643 CYP4F30P-202ENST00000420048 405 ntBASIC5.77□□□□□ -1.49
LTBQ06643 GPN3P1-201ENST00000423883 535 ntBASIC5.77□□□□□ -1.49
LTBQ06643 RPL12P12-201ENST00000424633 501 ntBASIC5.77□□□□□ -1.49
LTBQ06643 MTCYBP32-201ENST00000427945 1084 ntBASIC5.77□□□□□ -1.49
LTBQ06643 AL645939.3-201ENST00000435408 225 ntBASIC5.77□□□□□ -1.49
LTBQ06643 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.77□□□□□ -1.49
LTBQ06643 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.77□□□□□ -1.49
LTBQ06643 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.77□□□□□ -1.49
LTBQ06643 AC110749.1-201ENST00000462007 357 ntBASIC5.77□□□□□ -1.49
LTBQ06643 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LTBQ06643 RN7SL177P-201ENST00000476596 299 ntBASIC5.77□□□□□ -1.49
LTBQ06643 AL133372.1-201ENST00000493565 745 ntBASIC5.77□□□□□ -1.49
LTBQ06643 RNU6-415P-201ENST00000516252 97 ntBASIC5.77□□□□□ -1.49
LTBQ06643 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.77□□□□□ -1.49
LTBQ06643 IGKV1D-22-201ENST00000518953 324 ntBASIC5.77□□□□□ -1.49
LTBQ06643 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.77□□□□□ -1.49
LTBQ06643 IGHV1-14-201ENST00000523391 241 ntBASIC5.77□□□□□ -1.49
LTBQ06643 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.77□□□□□ -1.49
LTBQ06643 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.77□□□□□ -1.49
LTBQ06643 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.77□□□□□ -1.49
LTBQ06643 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.77□□□□□ -1.49
LTBQ06643 AC233702.7-202ENST00000582941 211 ntBASIC5.77□□□□□ -1.49
LTBQ06643 MIR4760-201ENST00000585040 80 ntBASIC5.77□□□□□ -1.49
LTBQ06643 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.77□□□□□ -1.49
LTBQ06643 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.77□□□□□ -1.49
LTBQ06643 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms