Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.04□□□□□ -1.28
GABPAQ06546 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
GABPAQ06546 TMSB4XP4-201ENST00000323496 618 ntBASIC7.04□□□□□ -1.28
GABPAQ06546 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.04□□□□□ -1.28
GABPAQ06546 RPS3AP2-201ENST00000407190 754 ntBASIC7.04□□□□□ -1.28
GABPAQ06546 TMA16P2-201ENST00000413187 601 ntBASIC7.04□□□□□ -1.28
GABPAQ06546 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
GABPAQ06546 AP000281.1-201ENST00000444036 316 ntBASIC7.04□□□□□ -1.28
GABPAQ06546 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.04□□□□□ -1.28
GABPAQ06546 HMGN1P36-201ENST00000446623 298 ntBASIC7.04□□□□□ -1.28
GABPAQ06546 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.04□□□□□ -1.28
GABPAQ06546 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
GABPAQ06546 RPL23AP40-201ENST00000487630 390 ntBASIC7.04□□□□□ -1.28
GABPAQ06546 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
GABPAQ06546 CYP4F27P-201ENST00000514557 494 ntBASIC7.04□□□□□ -1.28
GABPAQ06546 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.04□□□□□ -1.28
GABPAQ06546 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.04□□□□□ -1.28
GABPAQ06546 MIR4301-201ENST00000577203 66 ntBASIC7.04□□□□□ -1.28
GABPAQ06546 AC011445.2-201ENST00000599274 173 ntBASIC7.04□□□□□ -1.28
GABPAQ06546 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.04□□□□□ -1.28
GABPAQ06546 AL450226.2-201ENST00000622913 439 ntBASIC7.04□□□□□ -1.28
GABPAQ06546 MIR4302-201ENST00000638058 60 ntBASIC7.04□□□□□ -1.28
GABPAQ06546 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.04□□□□□ -1.28
GABPAQ06546 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
GABPAQ06546 AC011504.1-201ENST00000623331 4103 ntBASIC7.04□□□□□ -1.28
GABPAQ06546 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.04□□□□□ -1.28
GABPAQ06546 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
GABPAQ06546 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
GABPAQ06546 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
GABPAQ06546 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
GABPAQ06546 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.03□□□□□ -1.28
GABPAQ06546 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
GABPAQ06546 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
GABPAQ06546 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.03□□□□□ -1.28
GABPAQ06546 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
GABPAQ06546 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
GABPAQ06546 AC106872.5-201ENST00000508856 1416 ntBASIC7.03□□□□□ -1.28
GABPAQ06546 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.03□□□□□ -1.28
GABPAQ06546 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
GABPAQ06546 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.03□□□□□ -1.28
GABPAQ06546 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.03□□□□□ -1.28
GABPAQ06546 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
GABPAQ06546 RN7SKP151-201ENST00000410230 316 ntBASIC7.03□□□□□ -1.28
GABPAQ06546 HSPE1P27-201ENST00000430808 296 ntBASIC7.03□□□□□ -1.28
GABPAQ06546 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.03□□□□□ -1.28
GABPAQ06546 RPS12P17-201ENST00000438591 377 ntBASIC7.03□□□□□ -1.28
GABPAQ06546 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.03□□□□□ -1.28
GABPAQ06546 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
GABPAQ06546 RN7SL174P-201ENST00000475578 289 ntBASIC7.03□□□□□ -1.28
GABPAQ06546 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC7.03□□□□□ -1.28
GABPAQ06546 AC008945.1-201ENST00000505144 499 ntBASIC7.03□□□□□ -1.28
GABPAQ06546 AC079600.1-201ENST00000550326 297 ntBASIC7.03□□□□□ -1.28
GABPAQ06546 AC091078.2-201ENST00000557145 559 ntBASIC7.03□□□□□ -1.28
GABPAQ06546 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.03□□□□□ -1.28
GABPAQ06546 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.03□□□□□ -1.28
GABPAQ06546 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
GABPAQ06546 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.03□□□□□ -1.28
GABPAQ06546 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.03□□□□□ -1.28
GABPAQ06546 USP9YP3-201ENST00000434481 1766 ntBASIC7.03□□□□□ -1.28
GABPAQ06546 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
GABPAQ06546 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.02□□□□□ -1.28
GABPAQ06546 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
GABPAQ06546 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
GABPAQ06546 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.02□□□□□ -1.29
GABPAQ06546 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
GABPAQ06546 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
GABPAQ06546 WDR95P-201ENST00000425638 1542 ntBASIC7.02□□□□□ -1.29
GABPAQ06546 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
GABPAQ06546 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
GABPAQ06546 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.02□□□□□ -1.29
GABPAQ06546 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.02□□□□□ -1.29
GABPAQ06546 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
GABPAQ06546 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
GABPAQ06546 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
GABPAQ06546 FUNDC2P3-201ENST00000334716 533 ntBASIC7.02□□□□□ -1.29
GABPAQ06546 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
GABPAQ06546 RNA5SP211-201ENST00000365516 117 ntBASIC7.02□□□□□ -1.29
GABPAQ06546 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
GABPAQ06546 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.02□□□□□ -1.29
GABPAQ06546 RPL36P18-201ENST00000419316 318 ntBASIC7.02□□□□□ -1.29
GABPAQ06546 AC007568.1-201ENST00000422912 471 ntBASIC7.02□□□□□ -1.29
GABPAQ06546 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.02□□□□□ -1.29
GABPAQ06546 RAB28P2-201ENST00000454299 641 ntBASIC7.02□□□□□ -1.29
GABPAQ06546 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.02□□□□□ -1.29
GABPAQ06546 RN7SL57P-201ENST00000493687 290 ntBASIC7.02□□□□□ -1.29
GABPAQ06546 AC106872.4-201ENST00000510050 523 ntBASIC7.02□□□□□ -1.29
GABPAQ06546 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
GABPAQ06546 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.02□□□□□ -1.29
GABPAQ06546 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.02□□□□□ -1.29
GABPAQ06546 HMGN2P36-201ENST00000529541 409 ntBASIC7.02□□□□□ -1.29
GABPAQ06546 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
GABPAQ06546 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.02□□□□□ -1.29
GABPAQ06546 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.02□□□□□ -1.29
GABPAQ06546 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.02□□□□□ -1.29
GABPAQ06546 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.02□□□□□ -1.29
GABPAQ06546 MIR6886-201ENST00000619864 61 ntBASIC7.02□□□□□ -1.29
GABPAQ06546 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.02□□□□□ -1.29
GABPAQ06546 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.02□□□□□ -1.29
GABPAQ06546 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
GABPAQ06546 PDZK1P1-202ENST00000425209 1350 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms