Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.02□□□□□ -1.61
LMO4P61968 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LMO4P61968 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LMO4P61968 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC5.02□□□□□ -1.61
LMO4P61968 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.02□□□□□ -1.61
LMO4P61968 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
LMO4P61968 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LMO4P61968 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.02□□□□□ -1.61
LMO4P61968 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC5.02□□□□□ -1.61
LMO4P61968 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.02□□□□□ -1.61
LMO4P61968 AC096921.2-201ENST00000561507 1916 ntBASIC5.02□□□□□ -1.61
LMO4P61968 AC027088.4-201ENST00000611559 1947 ntBASIC5.02□□□□□ -1.61
LMO4P61968 AC062029.1-202ENST00000606164 3651 ntBASIC5.02□□□□□ -1.61
LMO4P61968 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LMO4P61968 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LMO4P61968 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LMO4P61968 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LMO4P61968 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.02□□□□□ -1.61
LMO4P61968 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LMO4P61968 EEF1B2P8-201ENST00000414101 671 ntBASIC5.02□□□□□ -1.61
LMO4P61968 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.02□□□□□ -1.61
LMO4P61968 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.02□□□□□ -1.61
LMO4P61968 AL451136.1-201ENST00000435399 325 ntBASIC5.02□□□□□ -1.61
LMO4P61968 AL022237.1-201ENST00000446663 358 ntBASIC5.02□□□□□ -1.61
LMO4P61968 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.02□□□□□ -1.61
LMO4P61968 RPL5P16-201ENST00000471467 790 ntBASIC5.02□□□□□ -1.61
LMO4P61968 AC083795.1-201ENST00000491760 320 ntBASIC5.02□□□□□ -1.61
LMO4P61968 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.02□□□□□ -1.61
LMO4P61968 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.02□□□□□ -1.61
LMO4P61968 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.02□□□□□ -1.61
LMO4P61968 OR56A7P-201ENST00000524865 941 ntBASIC5.02□□□□□ -1.61
LMO4P61968 GTF2IP11-201ENST00000526931 420 ntBASIC5.02□□□□□ -1.61
LMO4P61968 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LMO4P61968 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.02□□□□□ -1.61
LMO4P61968 AC084033.1-201ENST00000550830 633 ntBASIC5.02□□□□□ -1.61
LMO4P61968 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.02□□□□□ -1.61
LMO4P61968 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
LMO4P61968 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.02□□□□□ -1.61
LMO4P61968 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.02□□□□□ -1.61
LMO4P61968 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.02□□□□□ -1.61
LMO4P61968 MIR4776-2-201ENST00000580204 80 ntBASIC5.02□□□□□ -1.61
LMO4P61968 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LMO4P61968 AC011445.2-201ENST00000599274 173 ntBASIC5.02□□□□□ -1.61
LMO4P61968 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.02□□□□□ -1.61
LMO4P61968 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.02□□□□□ -1.61
LMO4P61968 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LMO4P61968 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.02□□□□□ -1.61
LMO4P61968 AC003992.1-201ENST00000635364 557 ntBASIC5.02□□□□□ -1.61
LMO4P61968 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.02□□□□□ -1.61
LMO4P61968 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LMO4P61968 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LMO4P61968 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LMO4P61968 RNF19BPY-201ENST00000458209 1550 ntBASIC5.02□□□□□ -1.61
LMO4P61968 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.02□□□□□ -1.61
LMO4P61968 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LMO4P61968 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.02□□□□□ -1.61
LMO4P61968 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.02□□□□□ -1.61
LMO4P61968 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LMO4P61968 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LMO4P61968 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LMO4P61968 MTCO1P8-201ENST00000416914 1523 ntBASIC5.02□□□□□ -1.61
LMO4P61968 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.02□□□□□ -1.61
LMO4P61968 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.02□□□□□ -1.61
LMO4P61968 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LMO4P61968 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC5.02□□□□□ -1.61
LMO4P61968 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LMO4P61968 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.01□□□□□ -1.61
LMO4P61968 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LMO4P61968 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LMO4P61968 MAK-202ENST00000354489 3941 ntTSL 5 BASIC5.01□□□□□ -1.61
LMO4P61968 TMEM75-201ENST00000624314 2165 ntBASIC5.01□□□□□ -1.61
LMO4P61968 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LMO4P61968 AC092692.1-201ENST00000623625 2595 ntBASIC5.01□□□□□ -1.61
LMO4P61968 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LMO4P61968 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
LMO4P61968 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LMO4P61968 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LMO4P61968 RN7SKP292-201ENST00000365522 317 ntBASIC5.01□□□□□ -1.61
LMO4P61968 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LMO4P61968 AL050305.1-201ENST00000399993 1230 ntBASIC5.01□□□□□ -1.61
LMO4P61968 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.01□□□□□ -1.61
LMO4P61968 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.01□□□□□ -1.61
LMO4P61968 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.01□□□□□ -1.61
LMO4P61968 MTND2P9-201ENST00000422293 931 ntBASIC5.01□□□□□ -1.61
LMO4P61968 CHEK2P5-201ENST00000423877 246 ntBASIC5.01□□□□□ -1.61
LMO4P61968 BX323845.3-201ENST00000428215 527 ntBASIC5.01□□□□□ -1.61
LMO4P61968 NFYAP1-201ENST00000431953 972 ntBASIC5.01□□□□□ -1.61
LMO4P61968 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.01□□□□□ -1.61
LMO4P61968 FABP5P2-201ENST00000439042 408 ntBASIC5.01□□□□□ -1.61
LMO4P61968 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.01□□□□□ -1.61
LMO4P61968 MTCO3P17-201ENST00000443775 513 ntBASIC5.01□□□□□ -1.61
LMO4P61968 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
LMO4P61968 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.01□□□□□ -1.61
LMO4P61968 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.01□□□□□ -1.61
LMO4P61968 RPL23AP60-201ENST00000450011 454 ntBASIC5.01□□□□□ -1.61
LMO4P61968 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.01□□□□□ -1.61
LMO4P61968 UBFD1P1-201ENST00000473259 814 ntBASIC5.01□□□□□ -1.61
LMO4P61968 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.01□□□□□ -1.61
LMO4P61968 RN7SL273P-201ENST00000481561 299 ntBASIC5.01□□□□□ -1.61
LMO4P61968 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms