Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.53□□□□□ -1.68
CMC4P56277 DPPA3P2-202ENST00000557188 1219 ntBASIC4.53□□□□□ -1.68
CMC4P56277 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC4.53□□□□□ -1.68
CMC4P56277 AC004232.2-201ENST00000574245 821 ntBASIC4.53□□□□□ -1.68
CMC4P56277 AC005244.1-201ENST00000582566 339 ntBASIC4.53□□□□□ -1.68
CMC4P56277 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.53□□□□□ -1.68
CMC4P56277 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CMC4P56277 AC119403.2-201ENST00000590960 598 ntBASIC4.53□□□□□ -1.68
CMC4P56277 AC079315.1-201ENST00000602952 623 ntBASIC4.53□□□□□ -1.68
CMC4P56277 MIR6780B-201ENST00000610307 79 ntBASIC4.53□□□□□ -1.68
CMC4P56277 AC010809.3-201ENST00000621310 641 ntBASIC4.53□□□□□ -1.68
CMC4P56277 AL162377.2-201ENST00000624532 337 ntBASIC4.53□□□□□ -1.68
CMC4P56277 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.53□□□□□ -1.68
CMC4P56277 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CMC4P56277 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CMC4P56277 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC4.53□□□□□ -1.68
CMC4P56277 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CMC4P56277 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
CMC4P56277 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CMC4P56277 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CMC4P56277 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CMC4P56277 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
CMC4P56277 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CMC4P56277 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.69
CMC4P56277 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.69
CMC4P56277 RBMY1HP-201ENST00000382759 1389 ntBASIC4.53□□□□□ -1.69
CMC4P56277 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
CMC4P56277 AC005034.3-201ENST00000604845 1747 ntBASIC4.52□□□□□ -1.69
CMC4P56277 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CMC4P56277 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC4.52□□□□□ -1.69
CMC4P56277 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 AL355377.1-201ENST00000621125 1653 ntBASIC4.52□□□□□ -1.69
CMC4P56277 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC4.52□□□□□ -1.69
CMC4P56277 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CMC4P56277 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CMC4P56277 RNA5SP375-201ENST00000362975 119 ntBASIC4.52□□□□□ -1.69
CMC4P56277 RN7SKP171-201ENST00000364417 303 ntBASIC4.52□□□□□ -1.69
CMC4P56277 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CMC4P56277 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 RPL23AP17-201ENST00000401064 499 ntBASIC4.52□□□□□ -1.69
CMC4P56277 AL121835.1-201ENST00000404250 354 ntBASIC4.52□□□□□ -1.69
CMC4P56277 RNA5SP115-201ENST00000411160 107 ntBASIC4.52□□□□□ -1.69
CMC4P56277 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.52□□□□□ -1.69
CMC4P56277 AL353662.1-201ENST00000439099 327 ntBASIC4.52□□□□□ -1.69
CMC4P56277 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC4.52□□□□□ -1.69
CMC4P56277 ATP5LP2-201ENST00000440646 311 ntBASIC4.52□□□□□ -1.69
CMC4P56277 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.52□□□□□ -1.69
CMC4P56277 AC005077.1-201ENST00000449226 375 ntBASIC4.52□□□□□ -1.69
CMC4P56277 RNU1-88P-201ENST00000459274 128 ntBASIC4.52□□□□□ -1.69
CMC4P56277 AC023245.1-201ENST00000468501 517 ntBASIC4.52□□□□□ -1.69
CMC4P56277 AC106822.1-201ENST00000502647 526 ntBASIC4.52□□□□□ -1.69
CMC4P56277 GAPDHP71-201ENST00000511530 1003 ntBASIC4.52□□□□□ -1.69
CMC4P56277 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC4.52□□□□□ -1.69
CMC4P56277 SETP21-201ENST00000514799 892 ntBASIC4.52□□□□□ -1.69
CMC4P56277 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.52□□□□□ -1.69
CMC4P56277 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.52□□□□□ -1.69
CMC4P56277 AC008429.4-201ENST00000521201 182 ntBASIC4.52□□□□□ -1.69
CMC4P56277 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.52□□□□□ -1.69
CMC4P56277 AC105036.1-201ENST00000566222 271 ntBASIC4.52□□□□□ -1.69
CMC4P56277 AC007066.2-202ENST00000566531 914 ntBASIC4.52□□□□□ -1.69
CMC4P56277 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC4.52□□□□□ -1.69
CMC4P56277 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.52□□□□□ -1.69
CMC4P56277 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC4.52□□□□□ -1.69
CMC4P56277 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.52□□□□□ -1.69
CMC4P56277 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.52□□□□□ -1.69
CMC4P56277 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.52□□□□□ -1.69
CMC4P56277 AC027334.1-201ENST00000603257 310 ntBASIC4.52□□□□□ -1.69
CMC4P56277 AC004890.3-201ENST00000605566 1095 ntBASIC4.52□□□□□ -1.69
CMC4P56277 AL136097.3-201ENST00000611097 505 ntBASIC4.52□□□□□ -1.69
CMC4P56277 AL512652.1-201ENST00000619006 500 ntBASIC4.52□□□□□ -1.69
CMC4P56277 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.52□□□□□ -1.69
CMC4P56277 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.52□□□□□ -1.69
CMC4P56277 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.52□□□□□ -1.69
CMC4P56277 AC073488.3-201ENST00000631611 778 ntBASIC4.52□□□□□ -1.69
CMC4P56277 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC4.52□□□□□ -1.69
CMC4P56277 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CMC4P56277 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CMC4P56277 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
CMC4P56277 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CMC4P56277 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CMC4P56277 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CMC4P56277 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CMC4P56277 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CMC4P56277 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC4.51□□□□□ -1.69
CMC4P56277 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms