Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HMGA1P17096 MIR323A-201ENST00000362199 86 ntBASIC6.18□□□□□ -1.42
HMGA1P17096 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGA1P17096 AL451046.1-201ENST00000406097 534 ntBASIC6.18□□□□□ -1.42
HMGA1P17096 RN7SKP229-201ENST00000410465 302 ntBASIC6.18□□□□□ -1.42
HMGA1P17096 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HMGA1P17096 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.18□□□□□ -1.42
HMGA1P17096 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.18□□□□□ -1.42
HMGA1P17096 NENFP3-201ENST00000503735 313 ntBASIC6.18□□□□□ -1.42
HMGA1P17096 CYCSP22-201ENST00000517555 339 ntBASIC6.18□□□□□ -1.42
HMGA1P17096 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.18□□□□□ -1.42
HMGA1P17096 TXNP4-201ENST00000575018 310 ntBASIC6.18□□□□□ -1.42
HMGA1P17096 AP001496.3-201ENST00000580230 913 ntBASIC6.18□□□□□ -1.42
HMGA1P17096 MIR6768-201ENST00000610734 72 ntBASIC6.18□□□□□ -1.42
HMGA1P17096 AL352984.2-201ENST00000611153 546 ntBASIC6.18□□□□□ -1.42
HMGA1P17096 OR11H2-202ENST00000641517 1085 ntBASIC6.18□□□□□ -1.42
HMGA1P17096 AC087269.2-201ENST00000641764 975 ntBASIC6.18□□□□□ -1.42
HMGA1P17096 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGA1P17096 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.18□□□□□ -1.42
HMGA1P17096 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HMGA1P17096 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
HMGA1P17096 AL121768.1-201ENST00000613917 2544 ntBASIC6.18□□□□□ -1.42
HMGA1P17096 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGA1P17096 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGA1P17096 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMGA1P17096 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
HMGA1P17096 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HMGA1P17096 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGA1P17096 SALL4P7-201ENST00000555779 3120 ntBASIC6.17□□□□□ -1.42
HMGA1P17096 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HMGA1P17096 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HMGA1P17096 MTCO1P11-201ENST00000429111 1528 ntBASIC6.17□□□□□ -1.42
HMGA1P17096 RNA5SP394-201ENST00000364216 119 ntBASIC6.17□□□□□ -1.42
HMGA1P17096 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.17□□□□□ -1.42
HMGA1P17096 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
HMGA1P17096 RN7SKP293-201ENST00000411389 296 ntBASIC6.17□□□□□ -1.42
HMGA1P17096 AC116036.1-201ENST00000412199 367 ntBASIC6.17□□□□□ -1.42
HMGA1P17096 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMGA1P17096 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGA1P17096 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.17□□□□□ -1.42
HMGA1P17096 DNAJC19P5-201ENST00000443295 316 ntBASIC6.17□□□□□ -1.42
HMGA1P17096 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.17□□□□□ -1.42
HMGA1P17096 RPL7L1P3-201ENST00000455249 689 ntBASIC6.17□□□□□ -1.42
HMGA1P17096 ACA64.4-201ENST00000459070 127 ntBASIC6.17□□□□□ -1.42
HMGA1P17096 AC093719.1-201ENST00000480427 441 ntBASIC6.17□□□□□ -1.42
HMGA1P17096 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.17□□□□□ -1.42
HMGA1P17096 SNORA81.2-201ENST00000516868 170 ntBASIC6.17□□□□□ -1.42
HMGA1P17096 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGA1P17096 AC090651.1-201ENST00000567865 634 ntBASIC6.17□□□□□ -1.42
HMGA1P17096 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGA1P17096 AL049840.6-201ENST00000604583 345 ntBASIC6.17□□□□□ -1.42
HMGA1P17096 AC004890.3-201ENST00000605566 1095 ntBASIC6.17□□□□□ -1.42
HMGA1P17096 AC109309.2-201ENST00000612597 332 ntBASIC6.17□□□□□ -1.42
HMGA1P17096 AL139099.4-201ENST00000614802 114 ntBASIC6.17□□□□□ -1.42
HMGA1P17096 RN7SL544P-201ENST00000617232 284 ntBASIC6.17□□□□□ -1.42
HMGA1P17096 RN7SL763P-201ENST00000620922 284 ntBASIC6.17□□□□□ -1.42
HMGA1P17096 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGA1P17096 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGA1P17096 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HMGA1P17096 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMGA1P17096 AC006511.3-201ENST00000624929 1783 ntBASIC6.16□□□□□ -1.42
HMGA1P17096 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC6.16□□□□□ -1.42
HMGA1P17096 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGA1P17096 SNORA64.1-201ENST00000362600 132 ntBASIC6.16□□□□□ -1.42
HMGA1P17096 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HMGA1P17096 AP003170.5-201ENST00000397185 335 ntBASIC6.16□□□□□ -1.42
HMGA1P17096 HMGB1P20-201ENST00000402555 677 ntBASIC6.16□□□□□ -1.42
HMGA1P17096 HMGA1P8-201ENST00000414130 321 ntBASIC6.16□□□□□ -1.42
HMGA1P17096 AC015977.1-201ENST00000418887 292 ntBASIC6.16□□□□□ -1.42
HMGA1P17096 AK4P4-201ENST00000419465 646 ntBASIC6.16□□□□□ -1.42
HMGA1P17096 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.16□□□□□ -1.42
HMGA1P17096 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.16□□□□□ -1.42
HMGA1P17096 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HMGA1P17096 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGA1P17096 RPS23P6-201ENST00000466136 431 ntBASIC6.16□□□□□ -1.42
HMGA1P17096 AL157777.1-201ENST00000468100 304 ntBASIC6.16□□□□□ -1.42
HMGA1P17096 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.16□□□□□ -1.42
HMGA1P17096 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGA1P17096 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.16□□□□□ -1.42
HMGA1P17096 OR4A42P-201ENST00000531397 938 ntBASIC6.16□□□□□ -1.42
HMGA1P17096 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.16□□□□□ -1.42
HMGA1P17096 DPPA2P4-201ENST00000563717 878 ntBASIC6.16□□□□□ -1.42
HMGA1P17096 GARSP1-201ENST00000570895 719 ntBASIC6.16□□□□□ -1.42
HMGA1P17096 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.16□□□□□ -1.42
HMGA1P17096 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.16□□□□□ -1.42
HMGA1P17096 AL596275.2-208ENST00000641192 594 ntBASIC6.16□□□□□ -1.42
HMGA1P17096 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.16□□□□□ -1.42
HMGA1P17096 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGA1P17096 RPS2P45-201ENST00000469997 2057 ntBASIC6.16□□□□□ -1.42
HMGA1P17096 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGA1P17096 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HMGA1P17096 AC022034.1-201ENST00000512867 2156 ntBASIC6.16□□□□□ -1.42
HMGA1P17096 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.15□□□□□ -1.42
HMGA1P17096 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMGA1P17096 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGA1P17096 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGA1P17096 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMGA1P17096 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMGA1P17096 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMGA1P17096 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms