Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.11□□□□□ -1.43
PCNAP12004 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCNAP12004 RNU6-386P-201ENST00000362650 107 ntBASIC6.11□□□□□ -1.43
PCNAP12004 RNA5SP85-201ENST00000365378 119 ntBASIC6.11□□□□□ -1.43
PCNAP12004 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.11□□□□□ -1.43
PCNAP12004 RNU11-201ENST00000387069 134 ntBASIC6.11□□□□□ -1.43
PCNAP12004 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCNAP12004 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.11□□□□□ -1.43
PCNAP12004 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
PCNAP12004 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.11□□□□□ -1.43
PCNAP12004 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.11□□□□□ -1.43
PCNAP12004 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.11□□□□□ -1.43
PCNAP12004 GTF3AP6-201ENST00000432585 986 ntBASIC6.11□□□□□ -1.43
PCNAP12004 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.11□□□□□ -1.43
PCNAP12004 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.11□□□□□ -1.43
PCNAP12004 GTF2IP14-201ENST00000441415 586 ntBASIC6.11□□□□□ -1.43
PCNAP12004 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.11□□□□□ -1.43
PCNAP12004 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.11□□□□□ -1.43
PCNAP12004 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC6.11□□□□□ -1.43
PCNAP12004 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
PCNAP12004 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.11□□□□□ -1.43
PCNAP12004 SNRPCP3-201ENST00000474888 476 ntBASIC6.11□□□□□ -1.43
PCNAP12004 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
PCNAP12004 RN7SL714P-201ENST00000487050 298 ntBASIC6.11□□□□□ -1.43
PCNAP12004 RPL37AP8-201ENST00000494116 276 ntBASIC6.11□□□□□ -1.43
PCNAP12004 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.11□□□□□ -1.43
PCNAP12004 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.11□□□□□ -1.43
PCNAP12004 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.11□□□□□ -1.43
PCNAP12004 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.11□□□□□ -1.43
PCNAP12004 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.11□□□□□ -1.43
PCNAP12004 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.11□□□□□ -1.43
PCNAP12004 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCNAP12004 TMF1P1-201ENST00000576058 373 ntBASIC6.11□□□□□ -1.43
PCNAP12004 AL360012.1-201ENST00000602813 131 ntBASIC6.11□□□□□ -1.43
PCNAP12004 AC024589.2-201ENST00000605642 1294 ntBASIC6.11□□□□□ -1.43
PCNAP12004 AC096586.2-201ENST00000610260 441 ntBASIC6.11□□□□□ -1.43
PCNAP12004 AC068726.1-201ENST00000610993 341 ntBASIC6.11□□□□□ -1.43
PCNAP12004 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.11□□□□□ -1.43
PCNAP12004 AL109620.1-201ENST00000618738 1197 ntBASIC6.11□□□□□ -1.43
PCNAP12004 AP000720.1-201ENST00000625091 483 ntBASIC6.11□□□□□ -1.43
PCNAP12004 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.11□□□□□ -1.43
PCNAP12004 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCNAP12004 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.11□□□□□ -1.43
PCNAP12004 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCNAP12004 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PCNAP12004 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.11□□□□□ -1.43
PCNAP12004 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.11□□□□□ -1.43
PCNAP12004 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
PCNAP12004 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCNAP12004 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.1□□□□□ -1.43
PCNAP12004 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.1□□□□□ -1.43
PCNAP12004 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCNAP12004 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCNAP12004 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.1□□□□□ -1.43
PCNAP12004 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PCNAP12004 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCNAP12004 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCNAP12004 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCNAP12004 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCNAP12004 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCNAP12004 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCNAP12004 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCNAP12004 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCNAP12004 RNA5SP485-201ENST00000365053 119 ntBASIC6.1□□□□□ -1.43
PCNAP12004 RNU6-564P-201ENST00000410983 104 ntBASIC6.1□□□□□ -1.43
PCNAP12004 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.1□□□□□ -1.43
PCNAP12004 CYP4F30P-202ENST00000420048 405 ntBASIC6.1□□□□□ -1.43
PCNAP12004 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.1□□□□□ -1.43
PCNAP12004 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.1□□□□□ -1.43
PCNAP12004 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.1□□□□□ -1.43
PCNAP12004 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCNAP12004 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PCNAP12004 AC092601.1-201ENST00000444526 383 ntBASIC6.1□□□□□ -1.43
PCNAP12004 AC073072.2-201ENST00000447425 348 ntBASIC6.1□□□□□ -1.43
PCNAP12004 COX4I1P2-201ENST00000447446 547 ntBASIC6.1□□□□□ -1.43
PCNAP12004 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.1□□□□□ -1.43
PCNAP12004 MARK2P8-201ENST00000476069 952 ntBASIC6.1□□□□□ -1.43
PCNAP12004 DEFB109A-201ENST00000482450 265 ntBASIC6.1□□□□□ -1.43
PCNAP12004 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.1□□□□□ -1.43
PCNAP12004 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.1□□□□□ -1.43
PCNAP12004 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.1□□□□□ -1.43
PCNAP12004 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.1□□□□□ -1.43
PCNAP12004 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.1□□□□□ -1.43
PCNAP12004 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.1□□□□□ -1.43
PCNAP12004 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.1□□□□□ -1.43
PCNAP12004 AL731537.2-201ENST00000561565 951 ntBASIC6.1□□□□□ -1.43
PCNAP12004 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.1□□□□□ -1.43
PCNAP12004 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.1□□□□□ -1.43
PCNAP12004 AC020915.5-201ENST00000596836 964 ntBASIC6.1□□□□□ -1.43
PCNAP12004 VN1R81P-201ENST00000602085 372 ntBASIC6.1□□□□□ -1.43
PCNAP12004 RPL21P136-201ENST00000605378 396 ntBASIC6.1□□□□□ -1.43
PCNAP12004 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.1□□□□□ -1.43
PCNAP12004 AC008833.1-201ENST00000611633 691 ntBASIC6.1□□□□□ -1.43
PCNAP12004 MIR6885-201ENST00000612241 66 ntBASIC6.1□□□□□ -1.43
PCNAP12004 AC104307.1-201ENST00000616142 196 ntBASIC6.1□□□□□ -1.43
PCNAP12004 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PCNAP12004 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCNAP12004 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCNAP12004 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCNAP12004 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms