Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL391361.1-201ENST00000405580 489 ntBASIC6.61□□□□□ -1.35
RB1P06400 MIR1178-201ENST00000408396 91 ntBASIC6.61□□□□□ -1.35
RB1P06400 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.61□□□□□ -1.35
RB1P06400 GAPDHP75-201ENST00000433910 943 ntBASIC6.61□□□□□ -1.35
RB1P06400 PCBP2P1-201ENST00000437262 977 ntBASIC6.61□□□□□ -1.35
RB1P06400 AP000281.1-201ENST00000444036 316 ntBASIC6.61□□□□□ -1.35
RB1P06400 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.61□□□□□ -1.35
RB1P06400 OR7L1P-201ENST00000456181 380 ntBASIC6.61□□□□□ -1.35
RB1P06400 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.61□□□□□ -1.35
RB1P06400 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.61□□□□□ -1.35
RB1P06400 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.61□□□□□ -1.35
RB1P06400 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.61□□□□□ -1.35
RB1P06400 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.61□□□□□ -1.35
RB1P06400 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.61□□□□□ -1.35
RB1P06400 AL008723.3-201ENST00000608926 449 ntBASIC6.61□□□□□ -1.35
RB1P06400 AC022106.1-201ENST00000612834 766 ntBASIC6.61□□□□□ -1.35
RB1P06400 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.61□□□□□ -1.35
RB1P06400 AC079776.5-201ENST00000641920 211 ntBASIC6.61□□□□□ -1.35
RB1P06400 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.61□□□□□ -1.35
RB1P06400 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
RB1P06400 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.61□□□□□ -1.35
RB1P06400 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.61□□□□□ -1.35
RB1P06400 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
RB1P06400 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.61□□□□□ -1.35
RB1P06400 AC092821.3-202ENST00000641304 2767 ntBASIC6.61□□□□□ -1.35
RB1P06400 AP000866.6-201ENST00000638898 3579 ntBASIC6.61□□□□□ -1.35
RB1P06400 WDR95P-201ENST00000425638 1542 ntBASIC6.6□□□□□ -1.35
RB1P06400 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.6□□□□□ -1.35
RB1P06400 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RB1P06400 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RB1P06400 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RB1P06400 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RB1P06400 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
RB1P06400 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RB1P06400 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RB1P06400 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
RB1P06400 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RB1P06400 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RB1P06400 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
RB1P06400 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.6□□□□□ -1.35
RB1P06400 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RB1P06400 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
RB1P06400 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
RB1P06400 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RB1P06400 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RB1P06400 AL050335.1-201ENST00000396909 869 ntBASIC6.6□□□□□ -1.35
RB1P06400 RN7SKP278-201ENST00000410504 342 ntBASIC6.6□□□□□ -1.35
RB1P06400 AL713922.1-201ENST00000416477 747 ntBASIC6.6□□□□□ -1.35
RB1P06400 RFESDP1-201ENST00000422350 461 ntBASIC6.6□□□□□ -1.35
RB1P06400 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.6□□□□□ -1.35
RB1P06400 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.6□□□□□ -1.35
RB1P06400 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.6□□□□□ -1.35
RB1P06400 AL163193.1-201ENST00000444895 788 ntBASIC6.6□□□□□ -1.35
RB1P06400 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.6□□□□□ -1.35
RB1P06400 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.6□□□□□ -1.35
RB1P06400 RNU6-775P-201ENST00000459318 96 ntBASIC6.6□□□□□ -1.35
RB1P06400 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
RB1P06400 AC090589.1-201ENST00000473109 362 ntBASIC6.6□□□□□ -1.35
RB1P06400 AC006539.1-201ENST00000481419 501 ntBASIC6.6□□□□□ -1.35
RB1P06400 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.6□□□□□ -1.35
RB1P06400 AP001960.1-201ENST00000506494 658 ntBASIC6.6□□□□□ -1.35
RB1P06400 AC096754.1-201ENST00000508904 818 ntBASIC6.6□□□□□ -1.35
RB1P06400 AC008429.4-201ENST00000521201 182 ntBASIC6.6□□□□□ -1.35
RB1P06400 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.6□□□□□ -1.35
RB1P06400 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.6□□□□□ -1.35
RB1P06400 MIR4489-201ENST00000578869 62 ntBASIC6.6□□□□□ -1.35
RB1P06400 AC015818.6-201ENST00000584274 634 ntBASIC6.6□□□□□ -1.35
RB1P06400 AC087468.1-201ENST00000604365 630 ntBASIC6.6□□□□□ -1.35
RB1P06400 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.6□□□□□ -1.35
RB1P06400 AL645933.2-201ENST00000606743 1207 ntBASIC6.6□□□□□ -1.35
RB1P06400 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.6□□□□□ -1.35
RB1P06400 AP005431.1-201ENST00000618479 319 ntBASIC6.6□□□□□ -1.35
RB1P06400 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.6□□□□□ -1.35
RB1P06400 AC116667.2-201ENST00000641075 823 ntBASIC6.6□□□□□ -1.35
RB1P06400 OR8G3P-202ENST00000641572 1255 ntBASIC6.6□□□□□ -1.35
RB1P06400 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
RB1P06400 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
RB1P06400 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.6□□□□□ -1.35
RB1P06400 AL132656.3-201ENST00000606384 1595 ntBASIC6.6□□□□□ -1.35
RB1P06400 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
RB1P06400 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RB1P06400 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RB1P06400 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.6□□□□□ -1.35
RB1P06400 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.6□□□□□ -1.35
RB1P06400 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
RB1P06400 AL078595.2-201ENST00000605309 1780 ntBASIC6.59□□□□□ -1.35
RB1P06400 CCAT2-201ENST00000630920 1752 ntBASIC6.59□□□□□ -1.35
RB1P06400 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RB1P06400 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RB1P06400 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
RB1P06400 AL133243.4-201ENST00000623116 3109 ntBASIC6.59□□□□□ -1.35
RB1P06400 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.59□□□□□ -1.35
RB1P06400 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RB1P06400 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.59□□□□□ -1.35
RB1P06400 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
RB1P06400 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
RB1P06400 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RB1P06400 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.59□□□□□ -1.35
RB1P06400 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
RB1P06400 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms