Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CLDN11O75508 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
CLDN11O75508 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.15□□□□□ -1.43
CLDN11O75508 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
CLDN11O75508 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CLDN11O75508 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.14□□□□□ -1.43
CLDN11O75508 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN11O75508 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
CLDN11O75508 THAP12P9-201ENST00000503971 2360 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN11O75508 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN11O75508 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN11O75508 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN11O75508 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.14□□□□□ -1.43
CLDN11O75508 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN11O75508 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.14□□□□□ -1.43
CLDN11O75508 SELENOWP1-201ENST00000322792 252 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.14□□□□□ -1.43
CLDN11O75508 AC016739.1-201ENST00000405359 345 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 BX284632.2-201ENST00000421091 399 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 KIF4CP-201ENST00000422742 1279 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 KCTD9P1-201ENST00000430462 1167 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 AL512605.1-202ENST00000441919 381 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 RPS7P3-201ENST00000443360 580 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.14□□□□□ -1.43
CLDN11O75508 AL359955.2-201ENST00000445380 353 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 AL162739.1-201ENST00000450606 307 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 SDC4P-201ENST00000453285 601 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.14□□□□□ -1.43
CLDN11O75508 AL122020.1-201ENST00000472287 459 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 AL035690.1-201ENST00000490892 383 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 AC008629.2-201ENST00000503783 483 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.14□□□□□ -1.43
CLDN11O75508 Y_RNA.667-201ENST00000516212 107 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CLDN11O75508 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.14□□□□□ -1.43
CLDN11O75508 AC008429.4-201ENST00000521201 182 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.14□□□□□ -1.43
CLDN11O75508 OR4A42P-201ENST00000531397 938 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 MIR4776-2-201ENST00000580204 80 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.14□□□□□ -1.43
CLDN11O75508 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.14□□□□□ -1.43
CLDN11O75508 MIR132-201ENST00000591554 101 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.14□□□□□ -1.43
CLDN11O75508 AL021918.2-201ENST00000613415 194 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 MIR6861-201ENST00000618657 64 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 AL359742.1-201ENST00000622497 540 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.14□□□□□ -1.43
CLDN11O75508 AC027088.4-201ENST00000611559 1947 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN11O75508 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CLDN11O75508 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CLDN11O75508 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CLDN11O75508 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN11O75508 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CLDN11O75508 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CLDN11O75508 AL121768.1-201ENST00000613917 2544 ntBASIC6.14□□□□□ -1.43
CLDN11O75508 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CLDN11O75508 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.13□□□□□ -1.43
CLDN11O75508 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CLDN11O75508 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
CLDN11O75508 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
CLDN11O75508 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CLDN11O75508 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.13□□□□□ -1.43
CLDN11O75508 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN11O75508 AC092646.2-201ENST00000431242 2095 ntBASIC6.13□□□□□ -1.43
CLDN11O75508 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN11O75508 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN11O75508 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN11O75508 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN11O75508 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN11O75508 AC023490.2-201ENST00000359859 470 ntBASIC6.13□□□□□ -1.43
CLDN11O75508 RN7SKP128-201ENST00000364270 303 ntBASIC6.13□□□□□ -1.43
CLDN11O75508 HMGN1P20-201ENST00000411849 300 ntBASIC6.13□□□□□ -1.43
CLDN11O75508 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.13□□□□□ -1.43
CLDN11O75508 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.13□□□□□ -1.43
CLDN11O75508 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.13□□□□□ -1.43
CLDN11O75508 AC099677.3-201ENST00000427081 395 ntBASIC6.13□□□□□ -1.43
CLDN11O75508 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.13□□□□□ -1.43
CLDN11O75508 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.13□□□□□ -1.43
CLDN11O75508 AK3P5-201ENST00000432033 519 ntBASIC6.13□□□□□ -1.43
CLDN11O75508 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.13□□□□□ -1.43
CLDN11O75508 AL445928.1-201ENST00000435545 222 ntBASIC6.13□□□□□ -1.43
CLDN11O75508 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.13□□□□□ -1.43
CLDN11O75508 ACA64.1-201ENST00000459171 127 ntBASIC6.13□□□□□ -1.43
CLDN11O75508 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.13□□□□□ -1.43
CLDN11O75508 RNA5SP438-201ENST00000516561 112 ntBASIC6.13□□□□□ -1.43
CLDN11O75508 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.13□□□□□ -1.43
CLDN11O75508 NANOGNBP2-201ENST00000544753 553 ntBASIC6.13□□□□□ -1.43
CLDN11O75508 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.13□□□□□ -1.43
CLDN11O75508 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.13□□□□□ -1.43
CLDN11O75508 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.13□□□□□ -1.43
CLDN11O75508 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.13□□□□□ -1.43
CLDN11O75508 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN11O75508 AL355377.1-201ENST00000621125 1653 ntBASIC6.13□□□□□ -1.43
CLDN11O75508 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN11O75508 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN11O75508 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CLDN11O75508 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms