Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MTND2P15-201ENST00000418575 892 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.24□□□□□ -1.41
SMAD6O43541 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SMAD6O43541 DNAJA1P5-201ENST00000440278 943 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 ATP5LP2-201ENST00000440646 311 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 AL512593.1-201ENST00000444758 779 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.24□□□□□ -1.41
SMAD6O43541 PPIAP27-201ENST00000453800 265 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.24□□□□□ -1.41
SMAD6O43541 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.24□□□□□ -1.41
SMAD6O43541 AC023194.2-201ENST00000465398 406 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 AC098847.1-201ENST00000473094 348 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.24□□□□□ -1.41
SMAD6O43541 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SMAD6O43541 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.24□□□□□ -1.41
SMAD6O43541 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
SMAD6O43541 RNA5SP340-201ENST00000517132 107 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 AC027369.2-201ENST00000528030 440 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.24□□□□□ -1.41
SMAD6O43541 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.24□□□□□ -1.41
SMAD6O43541 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.24□□□□□ -1.41
SMAD6O43541 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.24□□□□□ -1.41
SMAD6O43541 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.24□□□□□ -1.41
SMAD6O43541 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.24□□□□□ -1.41
SMAD6O43541 AC024589.2-201ENST00000605642 1294 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 AL021368.3-201ENST00000607119 578 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 MIR6778-201ENST00000617912 73 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 AC073488.3-201ENST00000631611 778 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 AL162456.1-201ENST00000634535 2006 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SMAD6O43541 AC096921.2-201ENST00000561507 1916 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SMAD6O43541 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SMAD6O43541 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
SMAD6O43541 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SMAD6O43541 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.24□□□□□ -1.41
SMAD6O43541 LINC01616-201ENST00000561816 2280 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMAD6O43541 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SMAD6O43541 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.24□□□□□ -1.41
SMAD6O43541 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMAD6O43541 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMAD6O43541 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SMAD6O43541 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SMAD6O43541 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
SMAD6O43541 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
SMAD6O43541 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMAD6O43541 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SMAD6O43541 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.23□□□□□ -1.41
SMAD6O43541 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SMAD6O43541 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.23□□□□□ -1.41
SMAD6O43541 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SMAD6O43541 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.23□□□□□ -1.41
SMAD6O43541 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.23□□□□□ -1.41
SMAD6O43541 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMAD6O43541 RBMY1HP-201ENST00000382759 1389 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SMAD6O43541 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMAD6O43541 RNA5SP375-201ENST00000362975 119 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SMAD6O43541 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
SMAD6O43541 MIR1282-201ENST00000408865 101 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 RN7SKP161-201ENST00000411110 305 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 AL096829.1-201ENST00000413677 457 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.23□□□□□ -1.41
SMAD6O43541 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.23□□□□□ -1.41
SMAD6O43541 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.23□□□□□ -1.41
SMAD6O43541 RPL35AP31-201ENST00000418340 337 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.23□□□□□ -1.41
SMAD6O43541 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMAD6O43541 AC092473.1-201ENST00000441098 221 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 SEPT14P12-201ENST00000442280 560 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.23□□□□□ -1.41
SMAD6O43541 ZNF619P1-201ENST00000446539 752 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 AL022237.1-201ENST00000446663 358 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.23□□□□□ -1.41
SMAD6O43541 AC103563.5-201ENST00000455643 364 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.23□□□□□ -1.41
SMAD6O43541 NDUFA5P5-201ENST00000468361 342 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 AC090589.1-201ENST00000473109 362 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.23□□□□□ -1.41
SMAD6O43541 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.23□□□□□ -1.41
SMAD6O43541 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.23□□□□□ -1.41
SMAD6O43541 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.23□□□□□ -1.41
SMAD6O43541 AC008676.3-201ENST00000521237 435 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.23□□□□□ -1.41
SMAD6O43541 AC025423.2-201ENST00000537570 439 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.23□□□□□ -1.41
SMAD6O43541 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.23□□□□□ -1.41
SMAD6O43541 AC115989.2-201ENST00000578640 563 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.23□□□□□ -1.41
SMAD6O43541 AC005726.4-201ENST00000582858 458 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 AC107993.1-201ENST00000591343 684 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMAD6O43541 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.23□□□□□ -1.41
SMAD6O43541 RPL21P136-201ENST00000605378 396 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 AC141002.1-201ENST00000607025 279 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 AC239803.2-201ENST00000610161 430 ntBASIC6.23□□□□□ -1.41
SMAD6O43541 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.23□□□□□ -1.41
SMAD6O43541 AF117829.2-201ENST00000619538 361 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms