Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SOX1O00570 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
SOX1O00570 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SOX1O00570 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SOX1O00570 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.56□□□□□ -1.2
SOX1O00570 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC7.56□□□□□ -1.2
SOX1O00570 RNU6-1005P-201ENST00000384519 107 ntBASIC7.56□□□□□ -1.2
SOX1O00570 RN7SKP216-201ENST00000411050 312 ntBASIC7.56□□□□□ -1.2
SOX1O00570 Y_RNA.625-201ENST00000411256 107 ntBASIC7.56□□□□□ -1.2
SOX1O00570 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX1O00570 MRPS21P5-201ENST00000417885 231 ntBASIC7.56□□□□□ -1.2
SOX1O00570 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX1O00570 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.56□□□□□ -1.2
SOX1O00570 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX1O00570 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX1O00570 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SOX1O00570 MRPS10P2-201ENST00000431226 381 ntBASIC7.56□□□□□ -1.2
SOX1O00570 AC092106.2-201ENST00000436597 487 ntBASIC7.56□□□□□ -1.2
SOX1O00570 CASP3P1-201ENST00000446037 609 ntBASIC7.56□□□□□ -1.2
SOX1O00570 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.56□□□□□ -1.2
SOX1O00570 BUD31P2-201ENST00000449374 300 ntBASIC7.56□□□□□ -1.2
SOX1O00570 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX1O00570 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.56□□□□□ -1.2
SOX1O00570 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX1O00570 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX1O00570 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SOX1O00570 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.56□□□□□ -1.2
SOX1O00570 AK4P6-201ENST00000505168 528 ntBASIC7.56□□□□□ -1.2
SOX1O00570 OR5H7P-201ENST00000514084 930 ntBASIC7.56□□□□□ -1.2
SOX1O00570 RNA5SP303-201ENST00000516192 130 ntBASIC7.56□□□□□ -1.2
SOX1O00570 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX1O00570 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX1O00570 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX1O00570 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC7.56□□□□□ -1.2
SOX1O00570 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SOX1O00570 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX1O00570 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX1O00570 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX1O00570 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC7.56□□□□□ -1.2
SOX1O00570 AC087465.1-201ENST00000560574 245 ntBASIC7.56□□□□□ -1.2
SOX1O00570 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX1O00570 EIF1P4-201ENST00000572664 335 ntBASIC7.56□□□□□ -1.2
SOX1O00570 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SOX1O00570 MIR3915-201ENST00000578518 97 ntBASIC7.56□□□□□ -1.2
SOX1O00570 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX1O00570 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX1O00570 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX1O00570 AL136363.2-201ENST00000604173 851 ntBASIC7.56□□□□□ -1.2
SOX1O00570 AC005377.1-201ENST00000605126 456 ntBASIC7.56□□□□□ -1.2
SOX1O00570 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SOX1O00570 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SOX1O00570 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX1O00570 PDCD6IPP1-202ENST00000622242 1064 ntBASIC7.56□□□□□ -1.2
SOX1O00570 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX1O00570 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX1O00570 FP325313.1-201ENST00000638228 703 ntBASIC7.56□□□□□ -1.2
SOX1O00570 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SOX1O00570 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC7.56□□□□□ -1.2
SOX1O00570 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.56□□□□□ -1.2
SOX1O00570 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SOX1O00570 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.56□□□□□ -1.2
SOX1O00570 CAST-222ENST00000508579 1758 ntTSL 2 BASIC7.56□□□□□ -1.2
SOX1O00570 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SOX1O00570 AL080317.3-201ENST00000607434 4315 ntBASIC7.56□□□□□ -1.2
SOX1O00570 ST5-237ENST00000530991 3396 ntTSL 2 BASIC7.56□□□□□ -1.2
SOX1O00570 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
SOX1O00570 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.55□□□□□ -1.2
SOX1O00570 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
SOX1O00570 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
SOX1O00570 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 AC020904.2-202ENST00000614660 1401 ntBASIC7.55□□□□□ -1.2
SOX1O00570 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.55□□□□□ -1.2
SOX1O00570 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SOX1O00570 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SOX1O00570 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SOX1O00570 Y_RNA.517-201ENST00000384551 106 ntBASIC7.55□□□□□ -1.2
SOX1O00570 YWHAZP4-201ENST00000392459 708 ntBASIC7.55□□□□□ -1.2
SOX1O00570 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 IGKV1OR2-3-201ENST00000411475 288 ntBASIC7.55□□□□□ -1.2
SOX1O00570 AL035422.1-201ENST00000414193 397 ntBASIC7.55□□□□□ -1.2
SOX1O00570 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC7.55□□□□□ -1.2
SOX1O00570 GTF2IP2-201ENST00000424290 697 ntBASIC7.55□□□□□ -1.2
SOX1O00570 AL645939.3-201ENST00000435408 225 ntBASIC7.55□□□□□ -1.2
SOX1O00570 COX7BP2-201ENST00000437976 242 ntBASIC7.55□□□□□ -1.2
SOX1O00570 AL357520.1-201ENST00000441557 453 ntBASIC7.55□□□□□ -1.2
SOX1O00570 VPS25P1-201ENST00000455691 508 ntBASIC7.55□□□□□ -1.2
SOX1O00570 RN7SL39P-201ENST00000462264 297 ntBASIC7.55□□□□□ -1.2
SOX1O00570 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC7.55□□□□□ -1.2
SOX1O00570 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC7.55□□□□□ -1.2
SOX1O00570 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms