Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 CYCSP38-201ENST00000559840 322 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 MIR4301-201ENST00000577203 66 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AL713998.2-201ENST00000604538 1198 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AL008723.3-201ENST00000608926 449 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AL365181.4-201ENST00000609800 547 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 BRD7P6-201ENST00000431406 1860 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 RNF19BPY-201ENST00000458209 1550 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AL078595.2-201ENST00000605309 1780 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 RN7SL326P-201ENST00000477493 296 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 RNU6-943P-201ENST00000516960 98 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 KCTD9P6-201ENST00000522306 950 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 HNRNPRP2-201ENST00000528421 743 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AC130364.2-201ENST00000528639 604 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 TRIM51DP-201ENST00000529746 596 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AP004609.2-201ENST00000532177 190 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AC027667.1-201ENST00000545814 304 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 MTND2P17-201ENST00000550281 688 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 MTATP6P25-201ENST00000574491 261 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AC008507.3-201ENST00000585753 472 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AC073333.2-201ENST00000603589 769 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AC092266.1-201ENST00000610958 165 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AC024255.1-201ENST00000614376 102 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 RFPL4AP6-201ENST00000616792 846 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 MIR7159-201ENST00000620587 66 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 MTCO1P22-201ENST00000604619 1360 ntBASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA3F8WFD2 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 AC090220.1-201ENST00000593078 1699 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 AC120036.2-201ENST00000509729 1474 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 RNA5SP514-201ENST00000363717 111 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 LCN1P2-201ENST00000372030 223 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 SNORA51.9-201ENST00000384295 124 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 AC240504.1-201ENST00000395709 845 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms