Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 IGLJCOR18-201ENST00000584002 424 ntBASIC6.46□□□□□ -1.38
SHISA3A0PJX4 ABBA01006766.1-201ENST00000584728 294 ntBASIC6.46□□□□□ -1.38
SHISA3A0PJX4 AC061975.5-201ENST00000584928 1441 ntBASIC6.46□□□□□ -1.38
SHISA3A0PJX4 AC008507.1-201ENST00000587506 734 ntBASIC6.46□□□□□ -1.38
SHISA3A0PJX4 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 AC068733.2-201ENST00000605434 1418 ntBASIC6.46□□□□□ -1.38
SHISA3A0PJX4 AC092354.1-201ENST00000606057 376 ntBASIC6.46□□□□□ -1.38
SHISA3A0PJX4 U47924.1-201ENST00000606539 434 ntBASIC6.46□□□□□ -1.38
SHISA3A0PJX4 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 AC135068.5-201ENST00000624197 983 ntBASIC6.46□□□□□ -1.38
SHISA3A0PJX4 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 AC183089.2-201ENST00000637931 916 ntBASIC6.46□□□□□ -1.38
SHISA3A0PJX4 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 SEC63P2-201ENST00000503863 1939 ntBASIC6.46□□□□□ -1.38
SHISA3A0PJX4 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 AP003471.1-202ENST00000319051 1988 ntBASIC6.46□□□□□ -1.38
SHISA3A0PJX4 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SHISA3A0PJX4 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AP000705.2-201ENST00000433524 1386 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC093909.5-201ENST00000621839 1799 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 RNU4-31P-201ENST00000384211 141 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 VN2R17P-201ENST00000391712 832 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AL512430.2-201ENST00000406786 339 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC007435.1-201ENST00000421086 415 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 RPS27AP7-201ENST00000422792 455 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 CYP4F32P-201ENST00000426492 504 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 NANOGP4-201ENST00000427230 913 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 MTCO1P3-201ENST00000429327 192 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 LSM3P3-201ENST00000436601 306 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 LINC01865-202ENST00000436808 853 ntTSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 KATNBL1P6-201ENST00000453433 915 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC027673.1-201ENST00000456245 405 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 RN7SL263P-201ENST00000467969 290 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC147055.4-201ENST00000504399 745 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC079395.1-201ENST00000510981 262 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 RNU6-528P-201ENST00000516926 100 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 ST13P6-201ENST00000522430 1102 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC084033.2-201ENST00000551532 967 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms