Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 RN7SL657P-201ENST00000582431 293 ntBASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC024267.2-201ENST00000582737 417 ntBASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC025857.2-201ENST00000602711 238 ntBASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC073389.3-201ENST00000609434 935 ntBASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 MIR6811-201ENST00000620409 58 ntBASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC130304.1-201ENST00000622942 2385 ntBASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
TRBV4-1A0A0J9YWV2 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 WDR95P-201ENST00000425638 1542 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 OR10R3P-201ENST00000361688 942 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 SNORD94-201ENST00000386037 137 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AL096829.1-201ENST00000413677 457 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 OR3D1P-201ENST00000438288 955 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AP003385.3-201ENST00000472498 287 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 RPS7P11-201ENST00000484240 586 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 OR52A4P-203ENST00000498233 1014 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC090958.1-201ENST00000511122 351 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC139713.1-202ENST00000512366 460 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 CCNHP1-201ENST00000513311 678 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 SNORA48.9-201ENST00000516419 162 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC136777.2-201ENST00000522979 358 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC021269.1-201ENST00000526860 705 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC087468.1-201ENST00000604365 630 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC097641.3-201ENST00000613523 464 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 MIR6070-201ENST00000613967 103 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 MTCO1P22-201ENST00000604619 1360 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC022325.1-201ENST00000502748 2199 ntBASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TRBV4-1A0A0J9YWV2 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV4-1A0A0J9YWV2 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV4-1A0A0J9YWV2 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.49□□□□□ -1.53
TRBV4-1A0A0J9YWV2 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.49□□□□□ -1.53
TRBV4-1A0A0J9YWV2 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.49□□□□□ -1.53
TRBV4-1A0A0J9YWV2 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV4-1A0A0J9YWV2 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV4-1A0A0J9YWV2 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC004076.2-201ENST00000620532 3323 ntBASIC5.49□□□□□ -1.53
TRBV4-1A0A0J9YWV2 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV4-1A0A0J9YWV2 AC140134.1-201ENST00000511830 3544 ntBASIC5.49□□□□□ -1.53
TRBV4-1A0A0J9YWV2 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRBV4-1A0A0J9YWV2 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV4-1A0A0J9YWV2 RNA5SP514-201ENST00000363717 111 ntBASIC5.49□□□□□ -1.53
TRBV4-1A0A0J9YWV2 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms