Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AC024587.1-201ENST00000505925 2157 ntBASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 FUNDC2P3-201ENST00000334716 533 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 RNFT1P3-201ENST00000340898 1052 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 RNA5SP273-201ENST00000362484 113 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AL096711.1-201ENST00000404780 554 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AL096829.1-201ENST00000413677 457 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 RPS29P14-201ENST00000431518 171 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AL389925.1-201ENST00000432257 728 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AL359091.1-201ENST00000449048 1734 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AC084754.1-201ENST00000463466 464 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 RN7SL221P-201ENST00000466190 281 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AC092865.4-201ENST00000477936 615 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 OR5H7P-201ENST00000514084 930 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AC068305.2-201ENST00000550567 1205 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AC091193.1-201ENST00000604640 448 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AL683813.2-201ENST00000605245 502 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AL021368.3-201ENST00000607119 578 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AL136228.1-201ENST00000622221 319 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AC129915.3-201ENST00000634128 948 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AC003992.1-201ENST00000635364 557 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AC034229.2-201ENST00000566945 2508 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 USP9YP3-201ENST00000434481 1766 ntBASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLCF1Q9UBD9 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 PSG10P-201ENST00000501199 1500 ntBASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 OR7E25P-201ENST00000344844 931 ntBASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 LYPLA1P3-201ENST00000402650 695 ntBASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 MTND4LP17-201ENST00000414607 293 ntBASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 RPS15AP30-201ENST00000420976 390 ntBASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 GAPDHP75-201ENST00000433910 943 ntBASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 AC103563.5-201ENST00000455643 364 ntBASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 AC006499.4-201ENST00000510947 694 ntBASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 Y_RNA.667-201ENST00000516212 107 ntBASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 RNU4ATAC-201ENST00000580972 127 ntBASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 AC067852.5-201ENST00000589299 310 ntBASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms