Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PHOX2BQ99453 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 ABI1-209ENST00000376166 3441 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 IARS2P1-201ENST00000508226 3173 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 MTCO1P11-201ENST00000429111 1528 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 MSRB3-212ENST00000614640 4270 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 LIPH-201ENST00000296252 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 EXOC6-204ENST00000443748 3310 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 AC068044.1-201ENST00000441585 1978 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 CD46-209ENST00000367047 3089 ntTSL 5 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 WISP3-204ENST00000368666 2700 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 OR10D1P-201ENST00000355343 936 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 RNU6-767P-201ENST00000384132 107 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 MORF4L1P1-201ENST00000404582 967 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 VN1R36P-201ENST00000414936 291 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 AL590806.1-201ENST00000415818 853 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 AC009299.1-201ENST00000429684 717 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 FCF1P1-201ENST00000432690 571 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 BMS1P19-201ENST00000433925 393 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 ACTP1-201ENST00000440793 383 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 AC027124.1-201ENST00000440852 466 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 NPM1P39-201ENST00000449818 867 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 AC022364.2-201ENST00000457963 554 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 RPS6P25-201ENST00000464444 748 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 ZBTB20-AS5-201ENST00000465249 622 ntTSL 3 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 AC112206.1-201ENST00000468416 477 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 ACTR3P3-201ENST00000480448 893 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 AP005202.1-201ENST00000489915 867 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 THAP6-203ENST00000502620 582 ntTSL 3 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 NPM1P27-201ENST00000502784 830 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 NAF1-205ENST00000509434 385 ntTSL 3 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 KCTD9P2-201ENST00000512203 1013 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 RN7SKP14-201ENST00000516000 329 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 ACER3-213ENST00000533873 929 ntTSL 2 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 ATP5J2P4-201ENST00000538774 267 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 FRG2HP-201ENST00000568807 832 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 TBC1D29-201ENST00000579181 652 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 AC011712.1-201ENST00000588959 234 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 AC119619.1-201ENST00000619728 112 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 AC009108.3-201ENST00000602739 3515 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 CA1-225ENST00000626824 2405 ntTSL 5 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 EEF1A1P42-201ENST00000613436 1331 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 NDUFB5-214ENST00000493866 4046 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 GRIA3-209ENST00000622768 5173 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 MAPK10-260ENST00000641047 2546 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 ZBTB14-207ENST00000614697 3341 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 NAT10-210ENST00000615292 3329 ntTSL 5 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 MTND4P27-201ENST00000450813 1354 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 MAN1A2P1-201ENST00000590286 1400 ntBASIC8.45□□□□□ -1.06
PHOX2BQ99453 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PHOX2BQ99453 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC8.45□□□□□ -1.06
PHOX2BQ99453 PRKAR1A-211ENST00000586397 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHOX2BQ99453 UTRN-203ENST00000367526 3220 ntTSL 5 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AL157713.1-201ENST00000379752 1531 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 VEZF1P1-201ENST00000423931 1541 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHOX2BQ99453 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHOX2BQ99453 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms