Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 RNU2-66P-201ENST00000410650 161 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 RN7SKP261-201ENST00000410948 278 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 RN7SKP142-201ENST00000411236 328 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 Z82198.3-201ENST00000421145 199 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC009480.2-201ENST00000422916 432 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AL354893.1-201ENST00000433735 348 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 OR5M13P-201ENST00000433944 937 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AL590682.1-201ENST00000437248 344 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 EEF1A1P39-201ENST00000440791 250 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AL356390.1-201ENST00000455684 397 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 RN7SL790P-201ENST00000474043 298 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC044810.1-201ENST00000480271 711 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC093663.2-201ENST00000484625 313 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC009153.1-201ENST00000485799 496 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 LINC00888-204ENST00000487386 421 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 RPS12P31-201ENST00000491419 398 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 PANCR-201ENST00000503456 493 ntTSL 5 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 DSTNP2-201ENST00000504533 515 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 RNU6-1045P-201ENST00000516321 107 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 RN7SKP244-201ENST00000516513 307 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 RN7SKP2-201ENST00000517003 319 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 PDCL2P2-201ENST00000533651 189 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC068790.1-201ENST00000536166 355 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AL121839.1-201ENST00000556233 1185 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC040162.2-201ENST00000573092 157 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC091805.2-201ENST00000603848 235 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC106900.2-201ENST00000604994 317 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 NDUFA8P1-201ENST00000605525 367 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC024940.5-201ENST00000622889 474 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC129908.1-201ENST00000624553 648 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 METAP1-212ENST00000625963 147 ntTSL 5 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 MTCO1P18-201ENST00000455518 1419 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 LRRC2-AS1-201ENST00000599511 2291 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC090181.3-201ENST00000624777 1514 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC017104.4-201ENST00000636283 1592 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AC008555.1-201ENST00000561778 2757 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AC093616.1-201ENST00000427434 2095 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 MT-TH-201ENST00000387441 69 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 BCRP8-201ENST00000412037 255 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 DNAJA1P2-201ENST00000421360 1197 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AL513174.1-201ENST00000423182 629 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 USP9YP18-201ENST00000425912 695 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 LINC00328-2P-201ENST00000436585 219 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 HMGN1P32-201ENST00000441744 256 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AC079841.1-201ENST00000481228 950 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AL117692.1-201ENST00000494283 713 ntBASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC8.68□□□□□ -1.02
TRIM47Q96LD4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms